RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ATP2C1P98194 919 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 ARID5AQ03989 594 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 UAP1Q16222 522 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 TTI2Q6NXR4 508 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 CACNA2D4Q7Z3S7 1137 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 MAGEB6Q8N7X4 407 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 PRCCQ92733 491 aaPredicted RBP16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 STRBPQ96SI9 672 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.14■□□□□ 0.175e-6■■□□□ 12.1
NCKIPSD-204ENST00000416649 PLAGL2Q9UPG8 496 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 STK38LQ9Y2H1 464 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 MPHOSPH10O00566 681 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 PPIP5K2O43314 1243 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 TNNC1P63316 161 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 ANKRD40Q6AI12 368 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 ZNF570Q96NI8 536 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 PLCD4Q9BRC7 762 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 KDM4CQ9H3R0 1056 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 CNNM2Q9H8M5 875 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 EBF2Q9HAK2 575 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 NLRC4Q9NPP4 1024 aa16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 NOP53Q9NZM5 478 aaKnown RBP16.14■□□□□ 0.17
NCKIPSD-204ENST00000416649 KLRK1P26718 216 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 FLT3P36888 993 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 CCDC26Q8TAB7 109 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 SDR42E1Q8WUS8 393 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 CHMP6Q96FZ7 201 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 DUSP9Q99956 384 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 AP1M1Q9BXS5 423 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 IRAK4Q9NWZ3 460 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 TLDC2A0PJX2 215 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 F8W031 263 aaPredicted RBP16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 SLC5A1P13866 664 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 DRD4P21917 467 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 CDCA2Q69YH5 1023 aaPredicted RBP16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 HPS3Q969F9 1004 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 LRRC45Q96CN5 670 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 ELAC2Q9BQ52 826 aaKnown RBP16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 PHF20Q9BVI0 1012 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 LRRC4BQ9NT99 713 aa16.13■□□□□ 0.17
NCKIPSD-204ENST00000416649 RFC4P35249 363 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 NLRP5P59047 1200 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 PKN1Q16512 942 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 TRIM68Q6AZZ1 485 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 KCNV2Q8TDN2 545 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 TRIM31Q9BZY9 425 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 GOLPH3Q9H4A6 298 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 LRRC4CQ9HCJ2 640 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 TFCP2L1Q9NZI6 479 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 SRRM3A6NNA2 597 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 KCNK3O14649 394 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 SNUPNO95149 360 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 VIMP08670 466 aaKnown RBP16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 KCNJ2P63252 427 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 BIRC3Q13489 604 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 GNPTABQ3T906 1256 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 ARMC3Q5W041 872 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 MIS18BP1Q6P0N0 1132 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 SPICE1Q8N0Z3 855 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 SPATA5Q8NB90 893 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 TAF4BQ92750 862 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 NLRP3Q96P20 1036 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 RNF26Q9BY78 433 aaPredicted RBP16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 TANGO6Q9C0B7 1094 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 NEUROG2Q9H2A3 272 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 CD2APQ9Y5K6 639 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 ABCC12Q96J65 1359 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 ORC4O43929 436 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 IFNAR2P48551 515 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 PDE4DQ08499 809 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 ARMC9Q7Z3E5 817 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 C3orf20Q8ND61 904 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 PNMA2Q9UL42 364 aa16.12■□□□□ 0.17
NCKIPSD-204ENST00000416649 MYH6P13533 1939 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 ADAMTS3O15072 1205 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 SEMA3FQ13275 785 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 MIIPQ5JXC2 388 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 KIF2BQ8N4N8 673 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 P2RX5Q93086 422 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 GPR101Q96P66 508 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 LRP2BPQ9P2M1 347 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 SWAP70Q9UH65 585 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 C5orf60A6NFR6 353 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 CEP104O60308 925 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 VEGFAP15692 232 aaPredicted RBP16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 UBA7P41226 1012 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 RWDD2BP57060 319 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 LRIG3Q6UXM1 1119 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 XPO6Q96QU8 1125 aaKnown RBP16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 DDX47Q9H0S4 455 aaKnown RBP16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 DPH5Q9H2P9 285 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 COL4A1P02462 1669 aa16.11■□□□□ 0.17
NCKIPSD-204ENST00000416649 TNKSO95271 1327 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 A8MUI8 341 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 H0YGN5 161 aa16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 SMNDC1O75940 238 aaKnown RBP eCLIP16.1■□□□□ 0.17
NCKIPSD-204ENST00000416649 GHRP10912 638 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms