RNA–Protein interactions for RNA: ENST00000415683.2

GTF3C2-203, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-203ENST00000415683 SLC4A8Q2Y0W8 1093 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 WDR45BQ5MNZ6 344 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 TTC39AQ5SRH9 613 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 FAM83BQ5T0W9 1011 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 NBPF12Q5TAG4 269 aaPredicted RBP5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 TSHZ3Q63HK5 1081 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 OTUD7BQ6GQQ9 843 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 C16orf87Q6PH81 154 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 C16orf54Q6UWD8 224 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 NFXL1Q6ZNB6 911 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 KIAA0907Q7Z7F0 614 aaPredicted RBP5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 CKAP2LQ8IYA6 745 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 NKAIN3Q8N8D7 197 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 VGLL2Q8N8G2 317 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 ZSCAN1Q8NBB4 408 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 ZNF280CQ8ND82 737 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 APPL2Q8NEU8 664 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 PANK1Q8TE04 598 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 SNX29Q8TEQ0 813 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 CCDC74AQ96AQ1 378 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 SKA1Q96BD8 255 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 TBC1D20Q96BZ9 403 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 PGBD4Q96DM1 585 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 ZIC5Q96T25 663 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 MAP3K14Q99558 947 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 NOL10Q9BSC4 688 aaKnown RBP5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 TSEN34Q9BSV6 310 aaKnown RBP5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 SELENOOQ9BVL4 669 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 KRTAP4-6Q9BYQ5 205 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 XPO4Q9C0E2 1151 aaKnown RBP5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.54□□□□□ -1.522e-6■■■□□ 16
GTF3C2-203ENST00000415683 USP40Q9NVE5 1235 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 FANCLQ9NW38 375 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 CNTN3Q9P232 1028 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 LRP2BPQ9P2M1 347 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 DDX41Q9UJV9 622 aaKnown RBP5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 RCAN3Q9UKA8 241 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 FZD1Q9UP38 647 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 KCNMB2Q9Y691 235 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 ARFGEF2Q9Y6D5 1785 aa5.54□□□□□ -1.52
GTF3C2-203ENST00000415683 PNMA6EA0A0J9YXQ4 647 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 GTPBP10A4D1E9 387 aaKnown RBP5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 CCDC85CA6NKD9 419 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 TPPPO94811 219 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 TBC1D8O95759 1140 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 CCDC159P0C7I6 412 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 PHKA1P46020 1223 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 ST13P50502 369 aaKnown RBP5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 INHBEP58166 350 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 GSTO1P78417 241 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 TCP10Q12799 353 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 LRRC41Q15345 812 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 TTF1Q15361 905 aaPredicted RBP5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 GRIK5Q16478 980 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 SPECC1Q5M775 1068 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 JAKMIP3Q5VZ66 844 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 DCAF15Q66K64 600 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 HHIPL2Q6UWX4 724 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 C14orf80Q86SX3 495 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 C11orf74Q86VG3 221 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 IQCF2Q8IXL9 164 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 CPXCR1Q8N123 301 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 TTC16Q8NEE8 873 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 ZBED3Q96IU2 234 aaPredicted RBP5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 CCDC94Q9BW85 323 aaPredicted RBP5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 MRIQ9BWK5 157 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 OSBPL7Q9BZF2 842 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 TMEM39BQ9GZU3 492 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 ELP3Q9H9T3 547 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 ZFYVE28Q9HCC9 887 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 RNF186Q9NXI6 227 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 NXF1Q9UBU9 619 aaKnown RBP5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 XPO7Q9UIA9 1087 aaKnown RBP5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 FNDC3AQ9Y2H6 1198 aaKnown RBP5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 CSADQ9Y600 493 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 DUOX1Q9NRD9 1551 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 CACNA1SQ13698 1873 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 SCN4AP35499 1836 aa5.53□□□□□ -1.52
GTF3C2-203ENST00000415683 IRS2Q9Y4H2 1338 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 VGLL3A8MV65 326 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 FAM155AB1AL88 458 aaPredicted RBP5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 USP2O75604 605 aaPredicted RBP5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 BAIAP3O94812 1187 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 SCGB1D2O95969 90 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 UQCRFS1P1P0C7P4 283 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 NCAM1P13591 858 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 PAX7P23759 505 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 PRDX5P30044 214 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 RACK1P63244 317 aaKnown RBP5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 PICALMQ13492 652 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 MTX1Q13505 466 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 TRIP4Q15650 581 aaPredicted RBP5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 ZNF394Q53GI3 561 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 DNAJC21Q5F1R6 531 aaKnown RBP5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 UTP14CQ5TAP6 766 aaKnown RBP5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 ANKRD45Q5TZF3 282 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 PPP4R3AQ6IN85 833 aa5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 APOBEC3HQ6NTF7 200 aaKnown RBP5.52□□□□□ -1.53
GTF3C2-203ENST00000415683 CFAP161Q6P656 301 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms