RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 FAM198AQ9UFP1 575 aa12.92□□□□□ -0.34
RBM28-202ENST00000415472 SNX12Q9UMY4 172 aa12.92□□□□□ -0.34
RBM28-202ENST00000415472 COL4A3BPQ9Y5P4 624 aa12.92□□□□□ -0.34
RBM28-202ENST00000415472 SCN9AQ15858 1988 aa12.92□□□□□ -0.34
RBM28-202ENST00000415472 MEIS1O00470 390 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 HLA-DOAP06340 250 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 CYP11B2P19099 503 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 RASSF7Q02833 373 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 PSMD2Q13200 908 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 HYIQ5T013 277 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 CCDC84Q86UT8 332 aaPredicted RBP12.91□□□□□ -0.34
RBM28-202ENST00000415472 DEF6Q9H4E7 631 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 MYO3BQ8WXR4 1341 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 ZC3H4Q9UPT8 1303 aaKnown RBP12.91□□□□□ -0.34
RBM28-202ENST00000415472 ANO9A1A5B4 782 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 BUB1O43683 1085 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 GDF11O95390 407 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 LMAN1P49257 510 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 FKBP3Q00688 224 aaKnown RBP12.91□□□□□ -0.34
RBM28-202ENST00000415472 SPIRE1Q08AE8 756 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 CCDC40Q4G0X9 1142 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 HERC4Q5GLZ8 1057 aaPredicted RBP12.91□□□□□ -0.34
RBM28-202ENST00000415472 SLC27A3Q5K4L6 730 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 SLFN13Q68D06 897 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 TSG101Q99816 390 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 KCTD10Q9H3F6 313 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 ABCB11O95342 1321 aa12.91□□□□□ -0.34
RBM28-202ENST00000415472 COL11A2P13942 1736 aaPredicted RBP12.9□□□□□ -0.34
RBM28-202ENST00000415472 GCFC2P16383 781 aaKnown RBP12.9□□□□□ -0.34
RBM28-202ENST00000415472 MAGEA1P43355 309 aa12.9□□□□□ -0.34
RBM28-202ENST00000415472 SLC12A3P55017 1021 aa12.9□□□□□ -0.34
RBM28-202ENST00000415472 USH1GQ495M9 461 aa12.9□□□□□ -0.34
RBM28-202ENST00000415472 PRR16Q569H4 304 aa12.9□□□□□ -0.34
RBM28-202ENST00000415472 CACNA2D4Q7Z3S7 1137 aa12.9□□□□□ -0.34
RBM28-202ENST00000415472 COL23A1Q86Y22 540 aaPredicted RBP12.9□□□□□ -0.34
RBM28-202ENST00000415472 CRYGNQ8WXF5 182 aa12.9□□□□□ -0.34
RBM28-202ENST00000415472 RIN2Q8WYP3 895 aaPredicted RBP12.9□□□□□ -0.34
RBM28-202ENST00000415472 CCDC102AQ96A19 550 aa12.9□□□□□ -0.34
RBM28-202ENST00000415472 LSM14BQ9BX40 385 aaKnown RBP12.9□□□□□ -0.34
RBM28-202ENST00000415472 ZHX3Q9H4I2 956 aa12.9□□□□□ -0.34
RBM28-202ENST00000415472 JRKLQ9Y4A0 524 aa12.9□□□□□ -0.34
RBM28-202ENST00000415472 FGFR1OPO95684 399 aaKnown RBP12.9□□□□□ -0.35
RBM28-202ENST00000415472 HOXD13P35453 343 aa12.9□□□□□ -0.35
RBM28-202ENST00000415472 TNNT3P45378 269 aaPredicted RBP12.9□□□□□ -0.35
RBM28-202ENST00000415472 POLR2FP61218 127 aaKnown RBP12.9□□□□□ -0.35
RBM28-202ENST00000415472 ARID5AQ03989 594 aa12.9□□□□□ -0.35
RBM28-202ENST00000415472 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.35
RBM28-202ENST00000415472 CERKLQ49MI3 558 aaPredicted RBP12.9□□□□□ -0.35
RBM28-202ENST00000415472 FAM83BQ5T0W9 1011 aa12.9□□□□□ -0.35
RBM28-202ENST00000415472 CATSPER3Q86XQ3 398 aa12.9□□□□□ -0.35
RBM28-202ENST00000415472 TRIM58Q8NG06 486 aa12.9□□□□□ -0.35
RBM28-202ENST00000415472 CYP2W1Q8TAV3 490 aa12.9□□□□□ -0.35
RBM28-202ENST00000415472 LENG9Q96B70 501 aa12.9□□□□□ -0.35
RBM28-202ENST00000415472 TSGA10Q9BZW7 698 aa12.9□□□□□ -0.35
RBM28-202ENST00000415472 EHD4Q9H223 541 aa12.9□□□□□ -0.35
RBM28-202ENST00000415472 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.35
RBM28-202ENST00000415472 DMGDHQ9UI17 866 aaKnown RBP12.9□□□□□ -0.35
RBM28-202ENST00000415472 C10orf71Q711Q0 1435 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 FAM86B1E9PN63 330 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 G3V3G9 751 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 USO1O60763 962 aaKnown RBP12.89□□□□□ -0.35
RBM28-202ENST00000415472 TACC1O75410 805 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 SYF2O95926 243 aaKnown RBP12.89□□□□□ -0.35
RBM28-202ENST00000415472 FAM86B2P0C5J1 330 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 NPR1P16066 1061 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 MATR3P43243 847 aaKnown RBP eCLIP12.89□□□□□ -0.356e-6■■■■□ 21.9
RBM28-202ENST00000415472 ARHGAP4P98171 946 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 CKAP4Q07065 602 aaKnown RBP12.89□□□□□ -0.35
RBM28-202ENST00000415472 PABPC4Q13310 644 aaKnown RBP eCLIP12.89□□□□□ -0.35
RBM28-202ENST00000415472 RRP1BQ14684 758 aaKnown RBP12.89□□□□□ -0.35
RBM28-202ENST00000415472 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 TRIM59Q8IWR1 403 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 ETNPPLQ8TBG4 499 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 EXOC4Q96A65 974 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 ZDHHC15Q96MV8 337 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 OSBPL9Q96SU4 736 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 LRRC1Q9BTT6 524 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 TLR10Q9BXR5 811 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 GBP3Q9H0R5 595 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 HPCAL4Q9UM19 191 aa12.89□□□□□ -0.35
RBM28-202ENST00000415472 CCDC66A2RUB6 948 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 SPATA31C1P0DKV0 1188 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 POLD1P28340 1107 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 HOXA13P31271 388 aaPredicted RBP12.88□□□□□ -0.35
RBM28-202ENST00000415472 RBM5P52756 815 aaKnown RBP eCLIP12.88□□□□□ -0.35
RBM28-202ENST00000415472 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 TDRD12Q587J7 1177 aaKnown RBP12.88□□□□□ -0.35
RBM28-202ENST00000415472 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 CCNI2Q6ZMN8 369 aaPredicted RBP12.88□□□□□ -0.35
RBM28-202ENST00000415472 DNAAF5Q86Y56 855 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 MSL3Q8N5Y2 521 aaKnown RBP12.88□□□□□ -0.35
RBM28-202ENST00000415472 MKL1Q969V6 931 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 IQCDQ96DY2 449 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 MS4A14Q96JA4 679 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 MBOAT7Q96N66 472 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 DHX36Q9H2U1 1008 aaKnown RBP12.88□□□□□ -0.35
RBM28-202ENST00000415472 EMILIN3Q9NT22 766 aa12.88□□□□□ -0.35
RBM28-202ENST00000415472 CYP3A7-CYP3A51PA0A087WV96 503 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms