RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 SCP2P22307 547 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 DDIT3P35638 169 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 NSFP46459 744 aaKnown RBP13.07□□□□□ -0.32
PTPRF-205ENST00000414879 LACTBP83111 547 aaPredicted RBP13.07□□□□□ -0.32
PTPRF-205ENST00000414879 ZBED6P86452 979 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 C16orf86Q6ZW13 317 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 ACAD9Q9H845 621 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 RAB20Q9NX57 234 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 ZNF233A6NK53 670 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 HSPA6P17066 643 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 POLR2FP61218 127 aaKnown RBP13.07□□□□□ -0.32
PTPRF-205ENST00000414879 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 XRRA1Q6P2D8 792 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 MAP7D3Q8IWC1 876 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 TTC39CQ8N584 583 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 OTUD6BQ8N6M0 293 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 GJA10Q969M2 543 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 ZHX2Q9Y6X8 837 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 RHOXF2BP0C7M4 288 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 TNFAIP2Q03169 654 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 BRD3Q15059 726 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 SEPT14Q6ZU15 432 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 GPR101Q96P66 508 aaPredicted RBP13.07□□□□□ -0.32
PTPRF-205ENST00000414879 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 RHOXF2Q9BQY4 288 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 PPP2R2CQ9Y2T4 447 aa13.07□□□□□ -0.32
PTPRF-205ENST00000414879 PIK3CAP42336 1068 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 ARHGAP4P98171 946 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 MTMR1Q13613 665 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 INTS8Q75QN2 995 aaKnown RBP13.06□□□□□ -0.32
PTPRF-205ENST00000414879 NBPF11Q86T75 865 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 MTMR4Q9NYA4 1195 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 FLT1P17948 1338 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 ASB14A6NK59 587 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 KIAA0391O15091 583 aaKnown RBP13.06□□□□□ -0.32
PTPRF-205ENST00000414879 STAM2O75886 525 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 RNF8O76064 485 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 CNGA1P29973 690 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 KYAT1Q16773 422 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 PPM1KQ8N3J5 372 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 MB21D1Q8N884 522 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 FAM76AQ8TAV0 307 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 C2orf40Q9H1Z8 148 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 ATP8B3O60423 1300 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 P3H4Q92791 437 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 RNF181Q9P0P0 153 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 ZBTB7AO95365 584 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 P4HBP07237 508 aaKnown RBP13.06□□□□□ -0.32
PTPRF-205ENST00000414879 HOXD10P28358 340 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 CBX1P83916 185 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 SCARF1Q14162 830 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 TBC1D10BQ4KMP7 808 aaPredicted RBP13.06□□□□□ -0.32
PTPRF-205ENST00000414879 RNF187Q5TA31 235 aaPredicted RBP13.06□□□□□ -0.32
PTPRF-205ENST00000414879 MYRIPQ8NFW9 859 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 BCL9O00512 1426 aa13.06□□□□□ -0.32
PTPRF-205ENST00000414879 TGFB2P61812 414 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 CDC42EP1Q00587 391 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 ZNF827Q17R98 1081 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 PANX2Q96RD6 677 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 RNF146Q9NTX7 359 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 TYW1Q9NV66 732 aaKnown RBP13.05□□□□□ -0.32
PTPRF-205ENST00000414879 AKT3Q9Y243 479 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 UBE2SQ16763 222 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 METTL23Q86XA0 190 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 NACA2Q9H009 215 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 ATP6V0A4Q9HBG4 840 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 OGFRQ9NZT2 677 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 ASIC3Q9UHC3 531 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 ADKP55263 362 aaKnown RBP13.05□□□□□ -0.32
PTPRF-205ENST00000414879 MYO1EQ12965 1108 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 QRICH1Q2TAL8 776 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 MRPL47Q9HD33 250 aaKnown RBP13.05□□□□□ -0.32
PTPRF-205ENST00000414879 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.05□□□□□ -0.32
PTPRF-205ENST00000414879 INO80B-WBP1J3KQ70 363 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 DLATP10515 647 aaKnown RBP13.05□□□□□ -0.32
PTPRF-205ENST00000414879 TRERF1Q96PN7 1200 aa13.05□□□□□ -0.32
PTPRF-205ENST00000414879 ZSCAN20P17040 1043 aaPredicted RBP13.04□□□□□ -0.32
PTPRF-205ENST00000414879 EIF2AK2P19525 551 aaKnown RBP13.04□□□□□ -0.32
PTPRF-205ENST00000414879 RFX1P22670 979 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 ZNF543Q08ER8 600 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 TTLL4Q14679 1199 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 DPCR1Q3MIW9 517 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 CCDC105Q8IYK2 499 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 ESYT2A0FGR8 921 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 ATP2C1P98194 919 aaPredicted RBP13.04□□□□□ -0.32
PTPRF-205ENST00000414879 KMT5BQ4FZB7 885 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 SNRNP48Q6IEG0 339 aaKnown RBP13.04□□□□□ -0.32
PTPRF-205ENST00000414879 DAAM2Q86T65 1068 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 CCDC127Q96BQ5 260 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 TUFT1Q9NNX1 390 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 K7ERI5 159 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 SRGAP1Q7Z6B7 1085 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 UBLCP1Q8WVY7 318 aaPredicted RBP13.04□□□□□ -0.32
PTPRF-205ENST00000414879 PPM1EQ8WY54 764 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 CARD6Q9BX69 1037 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 KCND2Q9NZV8 630 aa13.04□□□□□ -0.32
PTPRF-205ENST00000414879 MAFGO15525 162 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms