RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 TTC38Q5R3I4 469 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 PSRC1Q6PGN9 363 aaPredicted RBP19.37■□□□□ 0.69
PTPRC-206ENST00000413409 SARM1Q6SZW1 724 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.37■□□□□ 0.69
PTPRC-206ENST00000413409 TMEM199Q8N511 208 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 CLIC6Q96NY7 704 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 TINF2Q9BSI4 451 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 PPP1R12CQ9BZL4 782 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 TUBE1Q9UJT0 475 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 PCDHA4Q9UN74 947 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 ZNFX1Q9P2E3 1918 aaKnown RBP19.37■□□□□ 0.69
PTPRC-206ENST00000413409 A0A0G2JMZ2 1700 aa19.37■□□□□ 0.69
PTPRC-206ENST00000413409 SYNRGQ9UMZ2 1314 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 MYADML2A6NDP7 307 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 hCG_1984214I3L0E3 225 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 RFXAPO00287 272 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 TPM3P06753 285 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 MSNP26038 577 aaKnown RBP19.36■□□□□ 0.69
PTPRC-206ENST00000413409 NLRP12P59046 1061 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 PLS1Q14651 629 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 SKIV2LQ15477 1246 aaKnown RBP19.36■□□□□ 0.69
PTPRC-206ENST00000413409 SLC35G1Q2M3R5 365 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 CERKLQ49MI3 558 aaPredicted RBP19.36■□□□□ 0.69
PTPRC-206ENST00000413409 EARS2Q5JPH6 523 aaKnown RBP19.36■□□□□ 0.69
PTPRC-206ENST00000413409 BLIDQ8IZY5 108 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 ZNF713Q8N859 430 aaPredicted RBP19.36■□□□□ 0.69
PTPRC-206ENST00000413409 CCDC12Q8WUD4 166 aaPredicted RBP19.36■□□□□ 0.69
PTPRC-206ENST00000413409 IL23AQ9NPF7 189 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 RTN4Q9NQC3 1192 aaKnown RBP19.36■□□□□ 0.69
PTPRC-206ENST00000413409 BARHL2Q9NY43 387 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 MTMR4Q9NYA4 1195 aa19.36■□□□□ 0.69
PTPRC-206ENST00000413409 HOOK1Q9UJC3 728 aaKnown RBP19.36■□□□□ 0.69
PTPRC-206ENST00000413409 FAM205CA6NFA0 338 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 GOLGA6L19H0YKK7 550 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 STXBP3O00186 592 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 AP5Z1O43299 807 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 FCER1AP12319 257 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 AKR1A1P14550 325 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 DSG3P32926 999 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 CYP2C18P33260 490 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 SHMT1P34896 483 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 ASPRV1Q53RT3 343 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 WWC2Q6AWC2 1192 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 KRBA2Q6ZNG9 492 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 TANGO6Q9C0B7 1094 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 CD320Q9NPF0 282 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 MTCH2Q9Y6C9 303 aa19.35■□□□□ 0.69
PTPRC-206ENST00000413409 MOXD2PA6NHM9 499 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 GOLGA6L6A8MZA4 724 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 KLRF2D3W0D1 207 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 M0R2N6 131 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 CYTH3O43739 400 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 SNHG28P0DPA3 235 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 AKR1B1P15121 316 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 CDC25BP30305 580 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 ATP2C1P98194 919 aaPredicted RBP19.34■□□□□ 0.69
PTPRC-206ENST00000413409 SEPT2Q15019 361 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 ZNF792Q3KQV3 632 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 ATG4CQ96DT6 458 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 CCDC17Q96LX7 622 aa19.34■□□□□ 0.69
PTPRC-206ENST00000413409 FGBP02675 491 aa19.33■□□□□ 0.69
PTPRC-206ENST00000413409 PPP2R2DQ66LE6 453 aa19.33■□□□□ 0.69
PTPRC-206ENST00000413409 KANK3Q6NY19 840 aa19.33■□□□□ 0.69
PTPRC-206ENST00000413409 PLA2G4DQ86XP0 818 aa19.33■□□□□ 0.69
PTPRC-206ENST00000413409 MB21D1Q8N884 522 aa19.33■□□□□ 0.69
PTPRC-206ENST00000413409 CNNM3Q8NE01 707 aa19.33■□□□□ 0.69
PTPRC-206ENST00000413409 WDFY4Q6ZS81 3184 aa19.33■□□□□ 0.68
PTPRC-206ENST00000413409 LRRC37A2A6NM11 1700 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 ESYT2A0FGR8 921 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 BECN2A8MW95 431 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 PI4K2BG5E9Z4 385 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 ZNF500O60304 480 aaPredicted RBP19.32■□□□□ 0.68
PTPRC-206ENST00000413409 TTLL1O95922 423 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 PDHBP11177 359 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 POU3F3P20264 500 aaPredicted RBP19.32■□□□□ 0.68
PTPRC-206ENST00000413409 ZNF75DP51815 510 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 OTOP2Q7RTS6 562 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 DHX40Q8IX18 779 aaKnown RBP19.32■□□□□ 0.68
PTPRC-206ENST00000413409 FAM126BQ8IXS8 530 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 GPKOWQ92917 476 aaPredicted RBP eCLIP19.32■□□□□ 0.68
PTPRC-206ENST00000413409 RRP36Q96EU6 259 aaKnown RBP19.32■□□□□ 0.68
PTPRC-206ENST00000413409 CCDC34Q96HJ3 373 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.32■□□□□ 0.68
PTPRC-206ENST00000413409 UMODL1Q5DID0 1318 aa19.32■□□□□ 0.68
PTPRC-206ENST00000413409 ARVCFO00192 962 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 ATP2B1P20020 1258 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 GRIN1Q05586 938 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 TMEM132BQ14DG7 1078 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 ARL6IP4Q66PJ3 421 aaKnown RBP19.31■□□□□ 0.68
PTPRC-206ENST00000413409 PIK3AP1Q6ZUJ8 805 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 HEATR3Q7Z4Q2 680 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 MMP19Q99542 508 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 PYM1Q9BRP8 204 aaKnown RBP19.31■□□□□ 0.68
PTPRC-206ENST00000413409 CSRNP2Q9H175 543 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 RIOX1Q9H6W3 641 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 MROH7Q68CQ1 1323 aa19.31■□□□□ 0.68
PTPRC-206ENST00000413409 EPOPA6NHQ4 379 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 PLCB2Q00722 1185 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 DPCR1Q3MIW9 517 aa19.3■□□□□ 0.68
PTPRC-206ENST00000413409 LONRF3Q496Y0 759 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms