RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 X6R8D5 127 aa6.33□□□□□ -1.4
HMGB3P31-201ENST00000413333 CCDC194A0A1B0GVG4 234 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 KRIT1O00522 736 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 CT47B1P0C2W7 299 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 ZGLP1P0C6A0 271 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 ATF3P18847 181 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 KIR2DL1P43626 348 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 KIR2DL2P43627 348 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 ERVK-21P61565 698 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 ZP2Q05996 745 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 RSPO4Q2I0M5 234 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 HSF5Q4G112 596 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 NKAPLQ5M9Q1 402 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 ANGEL2Q5VTE6 544 aaKnown RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 FSTL4Q6MZW2 842 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 PGM2L1Q6PCE3 622 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 Q8N1Y9 231 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 CBARPQ8N350 705 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 NUP43Q8NFH3 380 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 LINC01599Q8WXQ3 324 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 SCYL1Q96KG9 808 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 ELF4Q99607 663 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 MTA3Q9BTC8 594 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 RTFDC1Q9BY42 306 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 CDH19Q9H159 772 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 LUC7LQ9NQ29 371 aaKnown RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 DSEQ9UL01 958 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 LUC7L2Q9Y383 392 aaKnown RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 NOC2LQ9Y3T9 749 aaKnown RBP6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 SPO11Q9Y5K1 396 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 TAF6LQ9Y6J9 622 aa6.32□□□□□ -1.4
HMGB3P31-201ENST00000413333 A0A1W2PQJ5 194 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 MAN2B1O00754 1011 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 DVL2O14641 736 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 DYRK3O43781 588 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 SNUPNO95149 360 aaKnown RBP6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 NTRK1P04629 796 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 ZSCAN20P17040 1043 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 LSP1P33241 339 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 HK2P52789 917 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 SCAND1P57086 179 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 KLF1Q13351 362 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 KIR3DS1Q14943 382 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 PCBP2Q15366 365 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 HABP4Q5JVS0 413 aaKnown RBP6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 MROH9Q5TGP6 573 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 HHIPL2Q6UWX4 724 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 SLC51AQ86UW1 340 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 NOSTRINQ8IVI9 506 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 RBM12BQ8IXT5 1001 aaKnown RBP6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 CMIPQ8IY22 773 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 TMEM151AQ8N4L1 468 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 SH3RF2Q8TEC5 729 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 JPH3Q8WXH2 748 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 MISP3Q96FF7 219 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 ALPK1Q96QP1 1244 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 MS4A5Q9H3V2 200 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 SLC6A20Q9NP91 592 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 LMCD1Q9NZU5 365 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 FBLN5Q9UBX5 448 aa6.31□□□□□ -1.4
HMGB3P31-201ENST00000413333 GOLGA8AA7E2F4 631 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 GOLGA8BA8MQT2 603 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 K7ESF4 209 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 SLC27A2O14975 620 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 KIF3BO15066 747 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 MSL3P1P0C860 447 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 CD8BP10966 210 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 GSK3AP49840 483 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 CORO7P57737 925 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 MVKQ03426 396 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 MLC1Q15049 377 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 TERF2Q15554 542 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 RGL3Q3MIN7 710 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 GALNT18Q6P9A2 607 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 PNMA8AQ86V59 439 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 STK11IPQ8N1F8 1099 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 ANKS4BQ8N8V4 417 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 NLGN2Q8NFZ4 835 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 SP110Q9HB58 689 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 PRDM7Q9NQW5 492 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 BSDC1Q9NW68 430 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 TMEM59LQ9UK28 342 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 SRPK3Q9UPE1 567 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 SLC5A6Q9Y289 635 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 ZNF652Q9Y2D9 606 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 ATP23Q9Y6H3 246 aa6.3□□□□□ -1.4
HMGB3P31-201ENST00000413333 LCHNA4D1U4 455 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 PRKCAP17252 672 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 PTX3P26022 381 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 RBM10P98175 930 aaKnown RBP6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 MSMPQ1L6U9 139 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 INAVAQ3KP66 663 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 STEAP3Q658P3 488 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 RASSF3Q86WH2 238 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 CCAR1Q8IX12 1150 aaKnown RBP6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 NLGN4XQ8N0W4 816 aa6.29□□□□□ -1.4
HMGB3P31-201ENST00000413333 C1orf162Q8NEQ5 155 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms