RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 AIPL1Q9NZN9 384 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 ESYT3A0FGR9 886 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 ZSCAN5CA6NGD5 496 aaPredicted RBP19.39■□□□□ 0.69
SDCBP-202ENST00000413219 FTCDO95954 541 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 ITGB3BPQ13352 177 aaPredicted RBP19.39■□□□□ 0.69
SDCBP-202ENST00000413219 CUL1Q13616 776 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 C10orf76Q5T2E6 689 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 TMC4Q7Z404 712 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 NLRP14Q86W24 1093 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 CABS1Q96KC9 395 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 TMBIM4Q9HC24 238 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 MTMR7Q9Y216 660 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 LDHBP07195 334 aaKnown RBP19.39■□□□□ 0.69
SDCBP-202ENST00000413219 GUCY2FP51841 1108 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 GUCY1A3Q02108 690 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 DRP2Q13474 957 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 PLCB4Q15147 1175 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 NEDD1Q8NHV4 660 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 WDR66Q8TBY9 1149 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 MYCBPAPQ8TBZ2 947 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 SNX29Q8TEQ0 813 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 TBC1D5Q92609 795 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 TAF4BQ92750 862 aa19.39■□□□□ 0.69
SDCBP-202ENST00000413219 MYCBPQ99417 103 aaPredicted RBP19.39■□□□□ 0.69
SDCBP-202ENST00000413219 BIN2Q9UBW5 565 aaPredicted RBP19.39■□□□□ 0.69
SDCBP-202ENST00000413219 NAV1Q8NEY1 1877 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 IRS2Q9Y4H2 1338 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 GOLGA6L10A6NI86 522 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 TRAF5O00463 557 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 RAD51CO43502 376 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 FAM107AO95990 144 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 POLR2FP61218 127 aaKnown RBP19.38■□□□□ 0.69
SDCBP-202ENST00000413219 DDR1Q08345 913 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 CERS3Q8IU89 383 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 TRIM59Q8IWR1 403 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 DNAJC19Q96DA6 116 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 PBKQ96KB5 322 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 CCT8L2Q96SF2 557 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 PLAAQ9Y263 795 aa19.38■□□□□ 0.69
SDCBP-202ENST00000413219 SNED1Q8TER0 1413 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 BHMG1C9JSJ3 638 aaPredicted RBP19.37■□□□□ 0.69
SDCBP-202ENST00000413219 MNAT1P51948 309 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 SETQ01105 290 aaPredicted RBP19.37■□□□□ 0.69
SDCBP-202ENST00000413219 COASYQ13057 564 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 KIAA0753Q2KHM9 967 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 GPIHBP1Q8IV16 184 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 SLC44A5Q8NCS7 719 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 CALR3Q96L12 384 aaKnown RBP19.37■□□□□ 0.69
SDCBP-202ENST00000413219 CPVLQ9H3G5 476 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 A1CFQ9NQ94 594 aaKnown RBP19.37■□□□□ 0.69
SDCBP-202ENST00000413219 LRRC41Q15345 812 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 IFI16Q16666 785 aaKnown RBP19.37■□□□□ 0.69
SDCBP-202ENST00000413219 FAM26FQ5R3K3 315 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 LRRC45Q96CN5 670 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 PIGSQ96S52 555 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 RIOX1Q9H6W3 641 aa19.37■□□□□ 0.69
SDCBP-202ENST00000413219 ATP8B3O60423 1300 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 A0A087X0T9 212 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 H0YHG0 523 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 SLC37A4O43826 429 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 LDHCP07864 332 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 FAM228BP0C875 321 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 GSCP56915 257 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-202ENST00000413219 KLHL30Q0D2K2 578 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 RPS6KA1Q15418 735 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 ASIC2Q16515 512 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 CEP85LQ5SZL2 805 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 C16orf86Q6ZW13 317 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 MAATS1Q7Z4T9 603 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 ZC3H3Q8IXZ2 948 aaKnown RBP19.36■□□□□ 0.69
SDCBP-202ENST00000413219 ACTRT1Q8TDG2 376 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 SCFD2Q8WU76 684 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 EYA3Q99504 573 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 TMEM260Q9NX78 707 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.36■□□□□ 0.69
SDCBP-202ENST00000413219 ATAD5Q96QE3 1844 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 POTEMA6NI47 508 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 NOVP48745 357 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 USP11P51784 963 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 BIRC3Q13489 604 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 RAPGEF1Q13905 1077 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 USP17L2Q6R6M4 530 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 KCNK18Q7Z418 384 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 GLIS3Q8NEA6 775 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 TGFBRAP1Q8WUH2 860 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 NYXQ9GZU5 481 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 GANQ9H2C0 597 aa19.36■□□□□ 0.69
SDCBP-202ENST00000413219 GCOM1H8Y6P7 765 aaPredicted RBP19.35■□□□□ 0.69
SDCBP-202ENST00000413219 MYZAPP0CAP1 466 aa19.35■□□□□ 0.69
SDCBP-202ENST00000413219 ADCY7P51828 1080 aa19.35■□□□□ 0.69
SDCBP-202ENST00000413219 C6orf89Q6UWU4 347 aa19.35■□□□□ 0.69
SDCBP-202ENST00000413219 NLRP3Q96P20 1036 aa19.35■□□□□ 0.69
SDCBP-202ENST00000413219 VCPKMTQ9H867 229 aa19.35■□□□□ 0.69
SDCBP-202ENST00000413219 BMP2KQ9NSY1 1161 aaPredicted RBP19.35■□□□□ 0.69
SDCBP-202ENST00000413219 PANK4Q9NVE7 773 aa19.35■□□□□ 0.69
SDCBP-202ENST00000413219 H0YGN5 161 aa19.34■□□□□ 0.69
SDCBP-202ENST00000413219 EDIL3O43854 480 aa19.34■□□□□ 0.69
SDCBP-202ENST00000413219 KIF4AO95239 1232 aa19.34■□□□□ 0.69
SDCBP-202ENST00000413219 TDP2O95551 362 aa19.34■□□□□ 0.69
SDCBP-202ENST00000413219 CDK8P49336 464 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms