RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
LINC00963-201ENST00000412141 PCDHA6Q9UN73 950 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 PCDHA8Q9Y5H6 950 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 SNX14Q9Y5W7 946 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 FRMPD4Q14CM0 1322 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 CNTNAP5Q8WYK1 1306 aa13.32□□□□□ -0.28
LINC00963-201ENST00000412141 TRIP12Q14669 1992 aaPredicted RBP13.31□□□□□ -0.28
LINC00963-201ENST00000412141 ATP9AO75110 1047 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 STAM2O75886 525 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 LGALS2P05162 132 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 CKBP12277 381 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 SELPP16109 830 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 CDC27P30260 824 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 ICAM3P32942 547 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 RFC2P35250 354 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 ADD1P35611 737 aaKnown RBP13.31□□□□□ -0.28
LINC00963-201ENST00000412141 RAB30Q15771 203 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 TSGA10IPQ3SY00 556 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 TYW1BQ6NUM6 668 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 BLOC1S2Q6QNY1 142 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 LRRC8DQ7L1W4 858 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 TMCO2Q7Z6W1 182 aaPredicted RBP13.31□□□□□ -0.28
LINC00963-201ENST00000412141 SESTD1Q86VW0 696 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 BRF1Q92994 677 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 GPR20Q99678 358 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 CERS4Q9HA82 394 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 FAM217BQ9NTX9 383 aaPredicted RBP13.31□□□□□ -0.28
LINC00963-201ENST00000412141 SETD4Q9NVD3 440 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 TET1Q8NFU7 2136 aa13.31□□□□□ -0.28
LINC00963-201ENST00000412141 TMEM265A0A087WTH1 108 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 C17orf102A2RUQ5 167 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 SMIM10L2AP0DMW4 78 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 SMIM10L2BP0DMW5 78 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 HOXD8P13378 290 aaPredicted RBP13.3□□□□□ -0.28
LINC00963-201ENST00000412141 ITGB5P18084 799 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 IGFBP4P22692 258 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 THPOP40225 353 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 METAP2P50579 478 aaKnown RBP eCLIP13.3□□□□□ -0.28
LINC00963-201ENST00000412141 FUT2Q10981 343 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 PTK7Q13308 1070 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 ZNF618Q5T7W0 954 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 PPP2R2DQ66LE6 453 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 XRRA1Q6P2D8 792 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 METTL7BQ6UX53 244 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 AFAP1L1Q8TED9 768 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 ATP6V0A1Q93050 837 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 UIMC1Q96RL1 719 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 RNPEPQ9H4A4 650 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 TMEM260Q9NX78 707 aa13.3□□□□□ -0.28
LINC00963-201ENST00000412141 SMCO2A6NFE2 343 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 TREHO43280 583 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 NBNO60934 754 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 PFKMP08237 780 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 HMGB1P09429 215 aaKnown RBP13.29□□□□□ -0.28
LINC00963-201ENST00000412141 MARK3P27448 753 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 HSPA4P34932 840 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 KCNJ6P48051 423 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 ADCY7P51828 1080 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 GPNMBQ14956 572 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 CCDC85BQ15834 202 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-201ENST00000412141 TCTN1Q2MV58 587 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 FAM117BQ6P1L5 589 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 CYP2W1Q8TAV3 490 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 GAS2L1Q99501 681 aaPredicted RBP13.29□□□□□ -0.28
LINC00963-201ENST00000412141 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
LINC00963-201ENST00000412141 DOCK5Q9H7D0 1870 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 STXBP3O00186 592 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 REC8O95072 547 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 CA3P07451 260 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 CTSHP09668 335 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 ARHGAP4P98171 946 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 MTMR1Q13613 665 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 TRIM71Q2Q1W2 868 aaKnown RBP13.28□□□□□ -0.28
LINC00963-201ENST00000412141 JAKMIP3Q5VZ66 844 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 KCNB2Q92953 911 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 GPRASP2Q96D09 838 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 SENP7Q9BQF6 1050 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 LARP6Q9BRS8 491 aaKnown RBP13.28□□□□□ -0.28
LINC00963-201ENST00000412141 EHMT1Q9H9B1 1298 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 RIC8AQ9NPQ8 531 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 PCDHA11Q9Y5I1 949 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 UBIAD1Q9Y5Z9 338 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 CHD7Q9P2D1 2997 aa13.28□□□□□ -0.28
LINC00963-201ENST00000412141 RSPH10B2B2RC85 870 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 RFXAPO00287 272 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 RSPH10BP0C881 870 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 KCNA2P16389 499 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 RPS6KB1P23443 525 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 TCF7P36402 384 aaPredicted RBP13.27□□□□□ -0.29
LINC00963-201ENST00000412141 ZNF76P36508 570 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 CCT2P78371 535 aaKnown RBP13.27□□□□□ -0.29
LINC00963-201ENST00000412141 DEFB103AP81534 67 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 ADGRE1Q14246 886 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 MBTPS1Q14703 1052 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 SERINC5Q86VE9 423 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 HERC6Q8IVU3 1022 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 MICALL1Q8N3F8 863 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 USP38Q8NB14 1042 aa13.27□□□□□ -0.29
LINC00963-201ENST00000412141 GLG1Q92896 1179 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms