RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 SENP6Q9GZR1 1112 aaPredicted RBP9.35□□□□□ -0.91
RPE-204ENST00000411934 FOXP1Q9H334 677 aaPredicted RBP9.35□□□□□ -0.91
RPE-204ENST00000411934 STARD7Q9NQZ5 370 aa9.35□□□□□ -0.91
RPE-204ENST00000411934 KCNH7Q9NS40 1196 aa9.35□□□□□ -0.91
RPE-204ENST00000411934 TMEM260Q9NX78 707 aa9.35□□□□□ -0.91
RPE-204ENST00000411934 DDX49Q9Y6V7 483 aaKnown RBP9.35□□□□□ -0.91
RPE-204ENST00000411934 ALPK3Q96L96 1907 aa9.35□□□□□ -0.91
RPE-204ENST00000411934 MYADML2A6NDP7 307 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 K7ELQ4 463 aaPredicted RBP9.34□□□□□ -0.91
RPE-204ENST00000411934 TBX3O15119 743 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 PPFIA3O75145 1194 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 F2P00734 622 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 ZNF76P36508 570 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 NFRKBQ6P4R8 1299 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 SLC39A5Q6ZMH5 540 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 ANKRD33Q7Z3H0 272 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 SESTD1Q86VW0 696 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 DIS3L2Q8IYB7 885 aaKnown RBP9.34□□□□□ -0.91
RPE-204ENST00000411934 TBCKQ8TEA7 893 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 TNFRSF25Q93038 417 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 SPATA33Q96N06 139 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 SDF4Q9BRK5 362 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 MLXIPQ9HAP2 919 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 TBC1D22BQ9NU19 505 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 TCEAL9Q9UHQ7 104 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 NR2E3Q9Y5X4 410 aa9.34□□□□□ -0.91
RPE-204ENST00000411934 EMSYQ7Z589 1322 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 FAM86B1E9PN63 330 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 ARVCFO00192 962 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 NOP56O00567 594 aaKnown RBP9.33□□□□□ -0.92
RPE-204ENST00000411934 FAM86B2P0C5J1 330 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 PDCP20941 246 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 TRAPPC10P48553 1259 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 SP2Q02086 613 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 PLA2G4DQ86XP0 818 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 HSCBQ8IWL3 235 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 SMAP1Q8IYB5 467 aaPredicted RBP9.33□□□□□ -0.92
RPE-204ENST00000411934 RASGRP4Q8TDF6 673 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 AFG1LQ8WV93 481 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 COPS5Q92905 334 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 TNPO1Q92973 898 aaKnown RBP9.33□□□□□ -0.92
RPE-204ENST00000411934 LENG9Q96B70 501 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 PGBD1Q96JS3 809 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 RIT2Q99578 217 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 AGO4Q9HCK5 861 aaKnown RBP9.33□□□□□ -0.92
RPE-204ENST00000411934 JPH1Q9HDC5 661 aaPredicted RBP9.33□□□□□ -0.92
RPE-204ENST00000411934 RTEL1Q9NZ71 1219 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 SLC9A2Q9UBY0 812 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 ZNF215Q9UL58 517 aaPredicted RBP9.33□□□□□ -0.92
RPE-204ENST00000411934 KCNJ14Q9UNX9 436 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 SMC3Q9UQE7 1217 aa9.33□□□□□ -0.92
RPE-204ENST00000411934 MKI67P46013 3256 aaKnown RBP9.33□□□□□ -0.92
RPE-204ENST00000411934 HAS3O00219 553 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 IPO5O00410 1097 aaKnown RBP9.32□□□□□ -0.92
RPE-204ENST00000411934 TLR3O15455 904 aaKnown RBP9.32□□□□□ -0.92
RPE-204ENST00000411934 EVI5O60447 810 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 SUPT20HL2P0C7V6 817 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 U2AF2P26368 475 aaKnown RBP eCLIP9.32□□□□□ -0.926e-8■■■□□ 14.9
RPE-204ENST00000411934 SLC26A2P50443 739 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 CDK7P50613 346 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 RTP1P59025 263 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 BEX3Q00994 111 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 KRT76Q01546 638 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 ITGA7Q13683 1181 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 LRRC26Q2I0M4 334 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 HSDL1Q3SXM5 330 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 ZNF746Q6NUN9 644 aaPredicted RBP9.32□□□□□ -0.92
RPE-204ENST00000411934 CXCL17Q6UXB2 119 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 CYFIP1Q7L576 1253 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 RDM1Q8NG50 284 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 SEPT1Q8WYJ6 367 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 FAM20AQ96MK3 541 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 GPR20Q99678 358 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 ZNF577Q9BSK1 485 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 PDE4DIPQ5VU43 2346 aa9.32□□□□□ -0.92
RPE-204ENST00000411934 DCDC2CA8MYV0 355 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 BTBD18B2RXH4 712 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 ADAMTS3O15072 1205 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 LGR5O75473 907 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 ATG7O95352 703 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 LGALS2P05162 132 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 RPLP2P05387 115 aaKnown RBP9.31□□□□□ -0.92
RPE-204ENST00000411934 MYL3P08590 195 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 GJB2P29033 226 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 HOXC8P31273 242 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 SFNP31947 248 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 NR5A1Q13285 461 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 INF2Q27J81 1249 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 PRR16Q569H4 304 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 TMEM63BQ5T3F8 832 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 PIK3AP1Q6ZUJ8 805 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 NOSTRINQ8IVI9 506 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 FAM126BQ8IXS8 530 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 SLFN12Q8IYM2 578 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 OXER1Q8TDS5 423 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 SLC5A5Q92911 643 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 KCNMB3Q9NPA1 279 aa9.31□□□□□ -0.92
RPE-204ENST00000411934 DDX25Q9UHL0 483 aaKnown RBP9.31□□□□□ -0.92
RPE-204ENST00000411934 FARP1Q9Y4F1 1045 aaPredicted RBP9.31□□□□□ -0.92
RPE-204ENST00000411934 IGKV6D-21A0A0A0MT36 114 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms