RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 PPTC7Q8NI37 304 aa13.64□□□□□ -0.23
NEDD1-202ENST00000411739 WASF1Q92558 559 aa13.64□□□□□ -0.23
NEDD1-202ENST00000411739 TRIM43BA6NCK2 446 aa13.64□□□□□ -0.23
NEDD1-202ENST00000411739 NOP56O00567 594 aaKnown RBP13.64□□□□□ -0.23
NEDD1-202ENST00000411739 XBP1P17861 261 aa13.64□□□□□ -0.23
NEDD1-202ENST00000411739 MDM2Q00987 491 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-202ENST00000411739 FAAP100Q0VG06 881 aa13.64□□□□□ -0.23
NEDD1-202ENST00000411739 ITGB3BPQ13352 177 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-202ENST00000411739 KRT40Q6A162 431 aa13.64□□□□□ -0.23
NEDD1-202ENST00000411739 TRIM50Q86XT4 487 aa13.64□□□□□ -0.23
NEDD1-202ENST00000411739 EMID1Q96A84 441 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-202ENST00000411739 TRIM43Q96BQ3 446 aaPredicted RBP13.64□□□□□ -0.23
NEDD1-202ENST00000411739 CABYRO75952 493 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 ITGB8P26012 769 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 METTL7BQ6UX53 244 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 PIK3AP1Q6ZUJ8 805 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 DAGLBQ8NCG7 672 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 GPR20Q99678 358 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 AGO4Q9HCK5 861 aaKnown RBP13.63□□□□□ -0.23
NEDD1-202ENST00000411739 PDLIM7Q9NR12 457 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 TRMT13Q9NUP7 481 aaKnown RBP13.63□□□□□ -0.23
NEDD1-202ENST00000411739 IGLV3-22A0A075B6J6 115 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 BTBD18B2RXH4 712 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 TDP2O95551 362 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 CYP3A4P08684 503 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 PRPF38BQ5VTL8 546 aaKnown RBP13.63□□□□□ -0.23
NEDD1-202ENST00000411739 CHRDL2Q6WN34 429 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 SENP7Q9BQF6 1050 aa13.63□□□□□ -0.23
NEDD1-202ENST00000411739 DCDC2CA8MYV0 355 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 C1orf53Q5VUE5 145 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 CDHR1Q96JP9 859 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 LLPHQ9BRT6 129 aaKnown RBP13.62□□□□□ -0.23
NEDD1-202ENST00000411739 TMEM39AQ9NV64 488 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 RANBP2P49792 3224 aaKnown RBP13.62□□□□□ -0.23
NEDD1-202ENST00000411739 CCDC194A0A1B0GVG4 234 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 B4GALT4O60513 344 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 PPFIA4O75335 1185 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 CLTBP09497 229 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 KRT2P35908 639 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 PSEN2P49810 448 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 TRIM29Q14134 588 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 NONOQ15233 471 aaKnown RBP eCLIP13.62□□□□□ -0.23
NEDD1-202ENST00000411739 KIAA0753Q2KHM9 967 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 LETM2Q2VYF4 491 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 GALNT17Q6IS24 598 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 ANKRD33Q7Z3H0 272 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 FAM126BQ8IXS8 530 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 FAM184AQ8NB25 1140 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 SLC43A3Q8NBI5 491 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 C8orf76Q96K31 380 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 C16orf70Q9BSU1 422 aa13.62□□□□□ -0.23
NEDD1-202ENST00000411739 GSTTP1A0A1W2PQM5 241 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 MMP1P03956 469 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 LGALS2P05162 132 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 CYP2C9P11712 490 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 ZNF200P98182 395 aaPredicted RBP13.61□□□□□ -0.23
NEDD1-202ENST00000411739 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 TEX2Q8IWB9 1127 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 DIS3L2Q8IYB7 885 aaKnown RBP13.61□□□□□ -0.23
NEDD1-202ENST00000411739 LENG9Q96B70 501 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 ZNF577Q9BSK1 485 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 PPP1R12CQ9BZL4 782 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 PRKAG2Q9UGJ0 569 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 KPNA6O60684 536 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 TCF7P36402 384 aaPredicted RBP13.61□□□□□ -0.23
NEDD1-202ENST00000411739 MAGEA10P43363 369 aaPredicted RBP13.61□□□□□ -0.23
NEDD1-202ENST00000411739 MFSD10Q14728 455 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 KRT25Q7Z3Z0 450 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 JPH1Q9HDC5 661 aaPredicted RBP13.61□□□□□ -0.23
NEDD1-202ENST00000411739 FOXD4L1Q9NU39 408 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 HDAC6Q9UBN7 1215 aa13.61□□□□□ -0.23
NEDD1-202ENST00000411739 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
NEDD1-202ENST00000411739 IPO5O00410 1097 aaKnown RBP13.6□□□□□ -0.23
NEDD1-202ENST00000411739 MAFGO15525 162 aa13.6□□□□□ -0.23
NEDD1-202ENST00000411739 CCNE2O96020 404 aa13.6□□□□□ -0.23
NEDD1-202ENST00000411739 ATP2B1P20020 1258 aa13.6□□□□□ -0.23
NEDD1-202ENST00000411739 MARK3P27448 753 aa13.6□□□□□ -0.23
NEDD1-202ENST00000411739 HIC1Q14526 733 aa13.6□□□□□ -0.23
NEDD1-202ENST00000411739 BADQ92934 168 aa13.6□□□□□ -0.23
NEDD1-202ENST00000411739 SDF4Q9BRK5 362 aa13.6□□□□□ -0.23
NEDD1-202ENST00000411739 SLC9A2Q9UBY0 812 aa13.6□□□□□ -0.23
NEDD1-202ENST00000411739 UMODL1Q5DID0 1318 aa13.6□□□□□ -0.23
NEDD1-202ENST00000411739 H3BRB1 525 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 WNT7AO00755 349 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 MSH4O15457 936 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
NEDD1-202ENST00000411739 F2P00734 622 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 CD4P01730 458 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 HOXD8P13378 290 aaPredicted RBP13.59□□□□□ -0.23
NEDD1-202ENST00000411739 CIITAP33076 1130 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 USP11P51784 963 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
NEDD1-202ENST00000411739 GIMAP8Q8ND71 665 aaPredicted RBP13.59□□□□□ -0.23
NEDD1-202ENST00000411739 TNFRSF25Q93038 417 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 TOX2Q96NM4 488 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 TUT1Q9H6E5 874 aaKnown RBP13.59□□□□□ -0.23
NEDD1-202ENST00000411739 SLC37A4O43826 429 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 RAG1P15918 1043 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 GJB2P29033 226 aa13.59□□□□□ -0.23
NEDD1-202ENST00000411739 ACTR2P61160 394 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms