RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 FBXO11Q86XK2 927 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 ZNF512BQ96KM6 892 aaPredicted RBP7.62□□□□□ -1.19
LINC00396-201ENST00000411690 DBNDD2Q9BQY9 259 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 ACAD9Q9H845 621 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 SLC38A10Q9HBR0 1119 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 VTA1Q9NP79 307 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 DCP1AQ9NPI6 582 aaPredicted RBP7.62□□□□□ -1.19
LINC00396-201ENST00000411690 FAM217BQ9NTX9 383 aaPredicted RBP7.62□□□□□ -1.19
LINC00396-201ENST00000411690 DNMT3LQ9UJW3 386 aa7.62□□□□□ -1.19
LINC00396-201ENST00000411690 DDX49Q9Y6V7 483 aaKnown RBP7.62□□□□□ -1.19
LINC00396-201ENST00000411690 E9PSI1 815 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 F5H6K3 240 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 LINC01565O15544 149 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 KPNA6O60684 536 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 CKBP12277 381 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 ICAM3P32942 547 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 GTF2F1P35269 517 aaKnown RBP eCLIP7.61□□□□□ -1.19
LINC00396-201ENST00000411690 CDK8P49336 464 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 KLRC3Q07444 240 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 ADAM15Q13444 863 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 MTX1Q13505 466 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 COL9A2Q14055 689 aaPredicted RBP7.61□□□□□ -1.19
LINC00396-201ENST00000411690 TNNI3KQ59H18 835 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 TMED8Q6PL24 325 aaPredicted RBP7.61□□□□□ -1.19
LINC00396-201ENST00000411690 OR6J1Q8NGC5 347 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 SDR42E1Q8WUS8 393 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 SSH1Q8WYL5 1049 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 MSLNLQ96KJ4 702 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 RPGRIP1Q96KN7 1286 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 YME1L1Q96TA2 773 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 MEIS3Q99687 375 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 WDR11Q9BZH6 1224 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 LMAN2LQ9H0V9 348 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 A1CFQ9NQ94 594 aaKnown RBP7.61□□□□□ -1.19
LINC00396-201ENST00000411690 FPGT-TNNI3KV9GXZ4 949 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 DCHS1Q96JQ0 3298 aa7.61□□□□□ -1.19
LINC00396-201ENST00000411690 RAD50Q92878 1312 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 CACNA1GO43497 2377 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 RNF225M0QZC1 329 aaPredicted RBP7.6□□□□□ -1.19
LINC00396-201ENST00000411690 LGR5O75473 907 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 RRP1P56182 461 aaKnown RBP7.6□□□□□ -1.19
LINC00396-201ENST00000411690 PTPN21Q16825 1174 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 ST3GAL2Q16842 350 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 ZNF385CQ66K41 422 aaPredicted RBP7.6□□□□□ -1.19
LINC00396-201ENST00000411690 ZBTB33Q86T24 672 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 KIAA2013Q8IYS2 634 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 TMEM105Q8N8V8 129 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 KCNG4Q8TDN1 519 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 PHF7Q9BWX1 381 aaPredicted RBP7.6□□□□□ -1.19
LINC00396-201ENST00000411690 GPR108Q9NPR9 543 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 INCENPQ9NQS7 918 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 KMT2BQ9UMN6 2715 aaPredicted RBP7.6□□□□□ -1.19
LINC00396-201ENST00000411690 FAM186AA6NE01 2351 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 CACNA1HO95180 2353 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 NAV1Q8NEY1 1877 aa7.6□□□□□ -1.19
LINC00396-201ENST00000411690 TRIP12Q14669 1992 aaPredicted RBP7.59□□□□□ -1.19
LINC00396-201ENST00000411690 GRM6O15303 877 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 UPP2O95045 317 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 CSPG5O95196 566 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 NDUFB10O96000 172 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 RB1P06400 928 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 CTNNB1P35222 781 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 RBL2Q08999 1139 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 COASYQ13057 564 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 CCDC184Q52MB2 194 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 GDF6Q6KF10 455 aaPredicted RBP7.59□□□□□ -1.19
LINC00396-201ENST00000411690 AMOTL1Q8IY63 956 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 SMRP1Q8NCR6 262 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 DBF4BQ8NFT6 615 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 MORC4Q8TE76 937 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 DHX38Q92620 1227 aaKnown RBP7.59□□□□□ -1.19
LINC00396-201ENST00000411690 TOP1MTQ969P6 601 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 PPP2R3CQ969Q6 453 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 COL26A1Q96A83 441 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 TRERF1Q96PN7 1200 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 CTAGE1Q96RT6 745 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 C11orf84Q9BUA3 381 aaPredicted RBP7.59□□□□□ -1.19
LINC00396-201ENST00000411690 ANTXR1Q9H6X2 564 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 RNF146Q9NTX7 359 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 FEM1BQ9UK73 627 aa7.59□□□□□ -1.19
LINC00396-201ENST00000411690 USP15Q9Y4E8 981 aaPredicted RBP7.59□□□□□ -1.19
LINC00396-201ENST00000411690 SCN10AQ9Y5Y9 1956 aa7.59□□□□□ -1.2
LINC00396-201ENST00000411690 MYH8P13535 1937 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 RIF1Q5UIP0 2472 aaKnown RBP7.58□□□□□ -1.2
LINC00396-201ENST00000411690 A6NJR5 290 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 C5orf67F2Z3F1 127 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 RBAK-RBAKDNI3L0D1 243 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 NKRFO15226 690 aaKnown RBP eCLIP7.58□□□□□ -1.2
LINC00396-201ENST00000411690 GNAI3P08754 354 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 BMP2P12643 396 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 ALAS1P13196 640 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 BMPR1AP36894 532 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 ARID5BQ14865 1188 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 TKFCQ3LXA3 575 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 RNFT1Q5M7Z0 435 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 ZNF618Q5T7W0 954 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 C12orf60Q5U649 245 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 C16orf86Q6ZW13 317 aa7.58□□□□□ -1.2
LINC00396-201ENST00000411690 SESTD1Q86VW0 696 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms