RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 M0R2N6 131 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 MEIS1O00470 390 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 SORBS3O60504 671 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 HOXD8P13378 290 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-205ENST00000409810 CIITAP33076 1130 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 CDK7P50613 346 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 TLE2Q04725 743 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 PTPN11Q06124 597 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-205ENST00000409810 SAFBQ15424 915 aaKnown RBP eCLIP12.4□□□□□ -0.42
CHMP3-205ENST00000409810 HSDL1Q3SXM5 330 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 NFRKBQ6P4R8 1299 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 PLA2G4DQ86XP0 818 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 CRYGNQ8WXF5 182 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 TMX3Q96JJ7 454 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 JPH1Q9HDC5 661 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-205ENST00000409810 PRDM5Q9NQX1 630 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-205ENST00000409810 PKD2L1Q9P0L9 805 aa12.4□□□□□ -0.42
CHMP3-205ENST00000409810 ZNF215Q9UL58 517 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-205ENST00000409810 ZMYND8Q9ULU4 1186 aaPredicted RBP12.4□□□□□ -0.42
CHMP3-205ENST00000409810 TRIP12Q14669 1992 aaPredicted RBP12.39□□□□□ -0.43
CHMP3-205ENST00000409810 WDR81Q562E7 1941 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 FAM86B1E9PN63 330 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 F2P00734 622 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 MMP1P03956 469 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 FAM86B2P0C5J1 330 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 ZNF286BP0CG31 522 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 PSMC6P62333 389 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 NPY5RQ15761 445 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 FAM47CQ5HY64 1035 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 MOXD1Q6UVY6 613 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 FAM126BQ8IXS8 530 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 SLC43A3Q8NBI5 491 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 CYP2W1Q8TAV3 490 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 TBCKQ8TEA7 893 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 C8orf76Q96K31 380 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 GPR20Q99678 358 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 NAP1L4Q99733 375 aaKnown RBP12.39□□□□□ -0.43
CHMP3-205ENST00000409810 AGO4Q9HCK5 861 aaKnown RBP12.39□□□□□ -0.43
CHMP3-205ENST00000409810 PDLIM7Q9NR12 457 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 SLC9A2Q9UBY0 812 aa12.39□□□□□ -0.43
CHMP3-205ENST00000409810 IGLV3-22A0A075B6J6 115 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 ADAMTS3O15072 1205 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 ATP9AO75110 1047 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 SUPT20HL2P0C7V6 817 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 ARP10275 920 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 SYN1P17600 705 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 PSEN2P49810 448 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 FOSBP53539 338 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 CHMP4BP1P59074 171 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 SP4Q02446 784 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 MFSD10Q14728 455 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 KIAA0753Q2KHM9 967 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 NBPF20Q3BBV1 942 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 PRR16Q569H4 304 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 KRT40Q6A162 431 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 NEK8Q86SG6 692 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 SEPT1Q8WYJ6 367 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 LBHD1Q9BQE6 289 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-205ENST00000409810 ZNF577Q9BSK1 485 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 TBC1D22BQ9NU19 505 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 TMEM39AQ9NV64 488 aa12.38□□□□□ -0.43
CHMP3-205ENST00000409810 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.38□□□□□ -0.43
CHMP3-205ENST00000409810 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
CHMP3-205ENST00000409810 KIAA0355O15063 1070 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 DTNBO60941 627 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 CD2BP2O95400 341 aaKnown RBP12.37□□□□□ -0.43
CHMP3-205ENST00000409810 LGALS2P05162 132 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 GCFC2P16383 781 aaKnown RBP12.37□□□□□ -0.43
CHMP3-205ENST00000409810 FAAP100Q0VG06 881 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 INF2Q27J81 1249 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 Q4G0T1 1027 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 PIK3AP1Q6ZUJ8 805 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 SESTD1Q86VW0 696 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 DIS3L2Q8IYB7 885 aaKnown RBP12.37□□□□□ -0.43
CHMP3-205ENST00000409810 C7orf31Q8N865 590 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 KAT2BQ92831 832 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 GJB4Q9NTQ9 266 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 NOD1Q9Y239 953 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 GRIN2DO15399 1336 aa12.37□□□□□ -0.43
CHMP3-205ENST00000409810 CYP3A7-CYP3A51PA0A087WV96 503 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 H3BRB1 525 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 HAS3O00219 553 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 B4GALT4O60513 344 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 CD4P01730 458 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 RAG1P15918 1043 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 CYP3A7P24462 503 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 TCF7P36402 384 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-205ENST00000409810 KRT76Q01546 638 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 ITGB3BPQ13352 177 aaPredicted RBP12.36□□□□□ -0.43
CHMP3-205ENST00000409810 GNL2Q13823 731 aaKnown RBP12.36□□□□□ -0.43
CHMP3-205ENST00000409810 LETM2Q2VYF4 491 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 UTP14CQ5TAP6 766 aaKnown RBP12.36□□□□□ -0.43
CHMP3-205ENST00000409810 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 TNPO1Q92973 898 aaKnown RBP12.36□□□□□ -0.43
CHMP3-205ENST00000409810 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 TUT1Q9H6E5 874 aaKnown RBP12.36□□□□□ -0.43
CHMP3-205ENST00000409810 AZI2Q9H6S1 392 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 BCAS3Q9H6U6 928 aa12.36□□□□□ -0.43
CHMP3-205ENST00000409810 DDX25Q9UHL0 483 aaKnown RBP12.36□□□□□ -0.43
CHMP3-205ENST00000409810 TANC1Q9C0D5 1861 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms