RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 CYP2C8P10632 490 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 ASIC1P78348 528 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 AMPD3Q01432 767 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 MYL5Q02045 173 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 ITGB3BPQ13352 177 aaPredicted RBP15.74■□□□□ 0.11
GPNMB-203ENST00000409458 KCNB1Q14721 858 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 CCL15Q16663 113 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 ZNF658Q5TYW1 1059 aaPredicted RBP15.74■□□□□ 0.11
GPNMB-203ENST00000409458 SPRYD7Q5W111 196 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 XRRA1Q6P2D8 792 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 VSIG10LQ86VR7 867 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 ANKRD35Q8N283 1001 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 BRI3BPQ8WY22 251 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 RIT2Q99578 217 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 POLR3CQ9BUI4 534 aaPredicted RBP15.74■□□□□ 0.11
GPNMB-203ENST00000409458 PNMA3Q9UL41 463 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 GDAQ9Y2T3 454 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 ASTN1O14525 1302 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 PFASO15067 1338 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 KIAA1217Q5T5P2 1943 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 TESPA1A2RU30 521 aaPredicted RBP15.73■□□□□ 0.11
GPNMB-203ENST00000409458 PPP1R3GB7ZBB8 358 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 BTBD19C9JJ37 291 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 DDX39AO00148 427 aaKnown RBP15.73■□□□□ 0.11
GPNMB-203ENST00000409458 ERCC3P19447 782 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 CNTN2Q02246 1040 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 CYP4A11Q02928 519 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 Q3C1V9 767 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 TRMT44Q8IYL2 757 aaKnown RBP15.73■□□□□ 0.11
GPNMB-203ENST00000409458 HSD3B7Q9H2F3 369 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 PDHXO00330 501 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 DHX15O43143 795 aaKnown RBP15.73■□□□□ 0.11
GPNMB-203ENST00000409458 RHOBTB3O94955 611 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 PLA2G4BP0C869 781 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 ZBTB48P10074 688 aaPredicted RBP15.73■□□□□ 0.11
GPNMB-203ENST00000409458 KLHL10Q6JEL2 608 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 DYDC2Q96IM9 177 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 MED15Q96RN5 788 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 RGL1Q9NZL6 768 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 SLC45A1Q9Y2W3 748 aa15.73■□□□□ 0.11
GPNMB-203ENST00000409458 SYNRGQ9UMZ2 1314 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 RGS20O76081 388 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 SLC25A27O95847 323 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 ERCC5P28715 1186 aaPredicted RBP15.72■□□□□ 0.11
GPNMB-203ENST00000409458 PSMC6P62333 389 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 ERVK-9P63128 1117 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 ERVK-24P63145 666 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 SEMA3FQ13275 785 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 CTTNQ14247 550 aaKnown RBP15.72■□□□□ 0.11
GPNMB-203ENST00000409458 CNNM4Q6P4Q7 775 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 SARM1Q6SZW1 724 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 ANKRD23Q86SG2 305 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 INPP4AQ96PE3 977 aaPredicted RBP15.72■□□□□ 0.11
GPNMB-203ENST00000409458 HSD17B14Q9BPX1 270 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 TUFT1Q9NNX1 390 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 CTNND2Q9UQB3 1225 aa15.72■□□□□ 0.11
GPNMB-203ENST00000409458 ATP9AO75110 1047 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 SSBP05455 408 aaKnown RBP eCLIP15.71■□□□□ 0.11
GPNMB-203ENST00000409458 COPB2P35606 906 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 ALDH5A1P51649 535 aaPredicted RBP15.71■□□□□ 0.11
GPNMB-203ENST00000409458 SLC12A3P55017 1021 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 HUNKP57058 714 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 TPM4P67936 248 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 CT47A1Q5JQC4 288 aaPredicted RBP15.71■□□□□ 0.11
GPNMB-203ENST00000409458 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.71■□□□□ 0.11
GPNMB-203ENST00000409458 DYMQ7RTS9 669 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 DNERQ8NFT8 737 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 GTF3C2Q8WUA4 911 aaPredicted RBP15.71■□□□□ 0.11
GPNMB-203ENST00000409458 DDX12PQ92771 950 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 GPRASP2Q96D09 838 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 LRRC27Q9C0I9 530 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 EXOC1Q9NV70 894 aa15.71■□□□□ 0.11
GPNMB-203ENST00000409458 DOCK5Q9H7D0 1870 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 POTEB2H3BUK9 544 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 SLITRK3O94933 977 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 ZNF75DP51815 510 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 PDE4DQ08499 809 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 FSTL1Q12841 308 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 EPHA7Q15375 998 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 UNC13DQ70J99 1090 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 NLRX1Q86UT6 975 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 GPBP1Q86WP2 473 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 FAM43AQ8N2R8 423 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 GIMAP8Q8ND71 665 aaPredicted RBP15.7■□□□□ 0.1
GPNMB-203ENST00000409458 ENOX1Q8TC92 643 aaKnown RBP15.7■□□□□ 0.1
GPNMB-203ENST00000409458 SMCR8Q8TEV9 937 aaPredicted RBP15.7■□□□□ 0.1
GPNMB-203ENST00000409458 TRIM5Q9C035 493 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 SOWAHBA6NEL2 793 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 FCER1AP12319 257 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 CYP11B2P19099 503 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 PRCPP42785 496 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 STX17P56962 302 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 MIER3Q7Z3K6 550 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 RASAL3Q86YV0 1011 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 FAM133AQ8N9E0 248 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 HPS3Q969F9 1004 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 CCDC47Q96A33 483 aaKnown RBP15.7■□□□□ 0.1
GPNMB-203ENST00000409458 DNAJC19Q96DA6 116 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 IWS1Q96ST2 819 aa15.7■□□□□ 0.1
GPNMB-203ENST00000409458 TBC1D22BQ9NU19 505 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms