RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 LRCH2Q5VUJ6 765 aa23.12■■□□□ 1.29
VSX1-203ENST00000409285 B3GNT9Q6UX72 402 aa23.12■■□□□ 1.29
VSX1-203ENST00000409285 DTHD1Q6ZMT9 781 aa23.12■■□□□ 1.29
VSX1-203ENST00000409285 PDGFCQ9NRA1 345 aa23.12■■□□□ 1.29
VSX1-203ENST00000409285 VAV3Q9UKW4 847 aa23.12■■□□□ 1.29
VSX1-203ENST00000409285 ZHX1Q9UKY1 873 aaPredicted RBP23.12■■□□□ 1.29
VSX1-203ENST00000409285 PCDHA12Q9UN75 941 aa23.12■■□□□ 1.29
VSX1-203ENST00000409285 NKRFO15226 690 aaKnown RBP eCLIP23.11■■□□□ 1.29
VSX1-203ENST00000409285 SP2Q02086 613 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 SPIRE1Q08AE8 756 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 PPP2R5CQ13362 524 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 CCDC144BQ3MJ40 725 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 DUSP28Q4G0W2 176 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 IGSF22Q8N9C0 903 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 KRI1Q8N9T8 703 aaKnown RBP23.11■■□□□ 1.29
VSX1-203ENST00000409285 EMID1Q96A84 441 aaPredicted RBP23.11■■□□□ 1.29
VSX1-203ENST00000409285 TTC12Q9H892 705 aaPredicted RBP23.11■■□□□ 1.29
VSX1-203ENST00000409285 GAS7O60861 476 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 TXNP10599 105 aaKnown RBP23.11■■□□□ 1.29
VSX1-203ENST00000409285 CACNB2Q08289 660 aaPredicted RBP23.11■■□□□ 1.29
VSX1-203ENST00000409285 IL17AQ16552 155 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 TMEM266Q2M3C6 531 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 SDF4Q9BRK5 362 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 RAB34Q9BZG1 259 aa23.11■■□□□ 1.29
VSX1-203ENST00000409285 MARCH6O60337 910 aa23.1■■□□□ 1.29
VSX1-203ENST00000409285 PRKAR2AP13861 404 aaKnown RBP23.1■■□□□ 1.29
VSX1-203ENST00000409285 MARCKSP29966 332 aaPredicted RBP23.1■■□□□ 1.29
VSX1-203ENST00000409285 ADCYAP1R1P41586 468 aa23.1■■□□□ 1.29
VSX1-203ENST00000409285 TXKP42681 527 aa23.1■■□□□ 1.29
VSX1-203ENST00000409285 PDIA5Q14554 519 aa23.1■■□□□ 1.29
VSX1-203ENST00000409285 FBXO46Q6PJ61 603 aaPredicted RBP23.1■■□□□ 1.29
VSX1-203ENST00000409285 METTL7BQ6UX53 244 aa23.1■■□□□ 1.29
VSX1-203ENST00000409285 ZNF579Q8NAF0 562 aaKnown RBP23.1■■□□□ 1.29
VSX1-203ENST00000409285 TRPV1Q8NER1 839 aa23.1■■□□□ 1.29
VSX1-203ENST00000409285 AK8Q96MA6 479 aa23.1■■□□□ 1.29
VSX1-203ENST00000409285 TEKT3Q9BXF9 490 aa23.1■■□□□ 1.29
VSX1-203ENST00000409285 FARP2O94887 1054 aaPredicted RBP23.09■■□□□ 1.29
VSX1-203ENST00000409285 AKR1A1P14550 325 aa23.09■■□□□ 1.29
VSX1-203ENST00000409285 LONP1P36776 959 aaKnown RBP23.09■■□□□ 1.29
VSX1-203ENST00000409285 KRT76Q01546 638 aa23.09■■□□□ 1.29
VSX1-203ENST00000409285 PRAMEF19Q5SWL8 479 aa23.09■■□□□ 1.29
VSX1-203ENST00000409285 GDPD2Q9HCC8 539 aa23.09■■□□□ 1.29
VSX1-203ENST00000409285 JPH1Q9HDC5 661 aaPredicted RBP23.09■■□□□ 1.29
VSX1-203ENST00000409285 FAM184BQ9ULE4 1060 aa23.09■■□□□ 1.29
VSX1-203ENST00000409285 ARID2Q68CP9 1835 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 VWA3AA6NCI4 1184 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 SEPT4O43236 478 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 CUTAO60888 179 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 INHAP05111 366 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 ME1P48163 572 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 TRIM32Q13049 653 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 LY6KQ17RY6 165 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 CELF3Q5SZQ8 465 aaKnown RBP23.08■■□□□ 1.29
VSX1-203ENST00000409285 AXDND1Q5T1B0 1012 aaPredicted RBP23.08■■□□□ 1.29
VSX1-203ENST00000409285 ZNF746Q6NUN9 644 aaPredicted RBP23.08■■□□□ 1.29
VSX1-203ENST00000409285 GJA10Q969M2 543 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 PCDHA7Q9UN72 937 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 GNEQ9Y223 722 aaKnown RBP23.08■■□□□ 1.29
VSX1-203ENST00000409285 Q9Y3F1 56 aa23.08■■□□□ 1.29
VSX1-203ENST00000409285 ADCY6O43306 1168 aa23.07■■□□□ 1.28
VSX1-203ENST00000409285 GGPS1O95749 300 aa23.07■■□□□ 1.28
VSX1-203ENST00000409285 SMPD1P17405 629 aa23.07■■□□□ 1.28
VSX1-203ENST00000409285 TNFAIP2Q03169 654 aa23.07■■□□□ 1.28
VSX1-203ENST00000409285 ADALQ6DHV7 355 aa23.07■■□□□ 1.28
VSX1-203ENST00000409285 SMAP1Q8IYB5 467 aaPredicted RBP23.07■■□□□ 1.28
VSX1-203ENST00000409285 RDM1Q8NG50 284 aa23.07■■□□□ 1.28
VSX1-203ENST00000409285 PKD2L1Q9P0L9 805 aa23.07■■□□□ 1.28
VSX1-203ENST00000409285 SLC9A2Q9UBY0 812 aa23.07■■□□□ 1.28
VSX1-203ENST00000409285 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.06■■□□□ 1.28
VSX1-203ENST00000409285 GH1P01241 217 aa23.06■■□□□ 1.28
VSX1-203ENST00000409285 SFNP31947 248 aa23.06■■□□□ 1.28
VSX1-203ENST00000409285 TECP42680 631 aa23.06■■□□□ 1.28
VSX1-203ENST00000409285 ARHGAP1Q07960 439 aa23.06■■□□□ 1.28
VSX1-203ENST00000409285 TCEAL9Q9UHQ7 104 aa23.06■■□□□ 1.28
VSX1-203ENST00000409285 DUSP11O75319 330 aaKnown RBP23.05■■□□□ 1.28
VSX1-203ENST00000409285 GRIN1Q05586 938 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 LAMC2Q13753 1193 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 SLC9C1Q4G0N8 1177 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 CYFIP1Q7L576 1253 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 UNC45AQ9H3U1 944 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 STK24Q9Y6E0 443 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 A0A1W2PQ27 194 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 A0A1W2PQ64 194 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 A0A1W2PQD8 194 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 POTEMA6NI47 508 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 WDR64B1ANS9 1081 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 CCNE2O96020 404 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 JAK3P52333 1124 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 TMEM63BQ5T3F8 832 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 DHX37Q8IY37 1157 aaKnown RBP23.05■■□□□ 1.28
VSX1-203ENST00000409285 UIMC1Q96RL1 719 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 CSRNP2Q9H175 543 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 MLXIPQ9HAP2 919 aa23.05■■□□□ 1.28
VSX1-203ENST00000409285 GOLGA6L22H0YM25 854 aa23.04■■□□□ 1.28
VSX1-203ENST00000409285 SLC26A4O43511 780 aa23.04■■□□□ 1.28
VSX1-203ENST00000409285 MSCO60682 206 aa23.04■■□□□ 1.28
VSX1-203ENST00000409285 ATG7O95352 703 aa23.04■■□□□ 1.28
VSX1-203ENST00000409285 NKX3-2P78367 333 aa23.04■■□□□ 1.28
VSX1-203ENST00000409285 PPTC7Q8NI37 304 aa23.04■■□□□ 1.28
VSX1-203ENST00000409285 CLIC6Q96NY7 704 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms