RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 CCDC50Q8IVM0 306 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 DBNDD1Q9H9R9 158 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 FAM184BQ9ULE4 1060 aa9.15□□□□□ -0.94
SNX13-201ENST00000409076 STXBP3O00186 592 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 RAD51CO43502 376 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 PLTPP55058 493 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 KCNA1Q09470 495 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 UBE4AQ14139 1066 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 EAPPQ56P03 285 aaPredicted RBP9.15□□□□□ -0.95
SNX13-201ENST00000409076 LINC00116Q8NCU8 138 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 MSANTD4Q8NCY6 345 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 MED4Q9NPJ6 270 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 RGL1Q9NZL6 768 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 MAD2L2Q9UI95 211 aa9.15□□□□□ -0.95
SNX13-201ENST00000409076 CDHR2Q9BYE9 1310 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 TBCAO75347 108 aaKnown RBP9.14□□□□□ -0.95
SNX13-201ENST00000409076 SRGNP10124 158 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 FUT2Q10981 343 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 PARP10Q53GL7 1025 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 CCDC121Q6ZUS5 278 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 IFT20Q8IY31 132 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 GIMAP7Q8NHV1 300 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 CABS1Q96KC9 395 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 RAB34Q9BZG1 259 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.14□□□□□ -0.95
SNX13-201ENST00000409076 PPP1R1BQ9UD71 204 aaPredicted RBP9.14□□□□□ -0.95
SNX13-201ENST00000409076 SNX24Q9Y343 169 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 FGFR1OPO95684 399 aaKnown RBP9.14□□□□□ -0.95
SNX13-201ENST00000409076 NR1D1P20393 614 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 MCM3P25205 808 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 SF3B2Q13435 895 aaKnown RBP9.14□□□□□ -0.95
SNX13-201ENST00000409076 SLC35G1Q2M3R5 365 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 TTMPQ5BVD1 217 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 CHADLQ6NUI6 762 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 TMED8Q6PL24 325 aaPredicted RBP9.14□□□□□ -0.95
SNX13-201ENST00000409076 SH3RF1Q7Z6J0 888 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 MYCT1Q8N699 235 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 TCP11Q8WWU5 503 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 GOLGA8IPA6NC78 632 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 GOLGA8JA6NMD2 632 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 ATP8B1O43520 1251 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 CLTAP09496 248 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 HARSP12081 509 aaKnown RBP9.14□□□□□ -0.95
SNX13-201ENST00000409076 PBX1P40424 430 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 COASYQ13057 564 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 NT5DC1Q5TFE4 455 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 KRT25Q7Z3Z0 450 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 CNBD1Q8NA66 436 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 PLA2G12BQ9BX93 195 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 ACP6Q9NPH0 428 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 MYH6P13533 1939 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 PNPLA7Q6ZV29 1317 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 WDR19Q8NEZ3 1342 aa9.14□□□□□ -0.95
SNX13-201ENST00000409076 GSTTP1A0A1W2PQM5 241 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 TULP2O00295 520 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 TTI1O43156 1089 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 KLRC4O43908 158 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 PPP1R12BO60237 982 aaPredicted RBP9.13□□□□□ -0.95
SNX13-201ENST00000409076 MAGEA9P43362 315 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 CASP4P49662 377 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 GNAQP50148 359 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 AMPD2Q01433 879 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 ECM1Q16610 540 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 MAN2A1Q16706 1144 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 ZC2HC1CQ53FD0 456 aaPredicted RBP9.13□□□□□ -0.95
SNX13-201ENST00000409076 EP400NLQ6ZTU2 488 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 CCDC127Q96BQ5 260 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 BHMT2Q9H2M3 363 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 THAP9Q9H5L6 903 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 PSTPIP2Q9H939 334 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 LUC7LQ9NQ29 371 aaKnown RBP9.13□□□□□ -0.95
SNX13-201ENST00000409076 KDM3BQ7LBC6 1761 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 PSMC6P62333 389 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 PPFIA1Q13136 1202 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 SMAD1Q15797 465 aaKnown RBP9.13□□□□□ -0.95
SNX13-201ENST00000409076 HAUS3Q68CZ6 603 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 SFR1Q86XK3 245 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 GLYCTKQ8IVS8 523 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 CPXCR1Q8N123 301 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 GIMAP8Q8ND71 665 aaPredicted RBP9.13□□□□□ -0.95
SNX13-201ENST00000409076 CYP2W1Q8TAV3 490 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 GDAP1Q8TB36 358 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 CASKIN2Q8WXE0 1202 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 SH2D4AQ9H788 454 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 USP40Q9NVE5 1235 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 PCDHA1Q9Y5I3 950 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 OVOS2A0A0G2JMS6 1433 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 TAF1P21675 1872 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 LRRC37A3O60309 1634 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 TOPAZ1Q8N9V7 1692 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 CETN3O15182 167 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 RASA1P20936 1047 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 PAK2Q13177 524 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 GRB10Q13322 594 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 TNIP1Q15025 636 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 ICE2Q659A1 982 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 PPP1R18Q6NYC8 613 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 GLG1Q92896 1179 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 BTBD6Q96KE9 485 aa9.13□□□□□ -0.95
SNX13-201ENST00000409076 BARHL2Q9NY43 387 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms