RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 RCAN1P53805 252 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PLCB3Q01970 1234 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 CDC37Q16543 378 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ARHGAP44Q17R89 818 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 GALNT17Q6IS24 598 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 CCDC62Q6P9F0 684 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 GDAP1Q8TB36 358 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ECT2Q9H8V3 914 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 SERPINA10Q9UK55 444 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 MAP3K15Q6ZN16 1313 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 THAP12O43422 761 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 CALUO43852 315 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 CIB2O75838 187 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 GAS8O95995 478 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 MDM2Q00987 491 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ANKRD20A3Q5VUR7 823 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 AEBP2Q6ZN18 517 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 FUKQ8N0W3 1084 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ARHGAP24Q8N264 748 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 TTLL11Q8NHH1 800 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ATP6V0A4Q9HBG4 840 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 CEP72Q9P209 647 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ANKIB1Q9P2G1 1089 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PNMA2Q9UL42 364 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PTPN22Q9Y2R2 807 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 CEP170BQ9Y4F5 1589 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ZSCAN5CA6NGD5 496 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 GLI1P08151 1106 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 EEF2P13639 858 aaKnown RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PRLRP16471 622 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ATP2A2P16615 1042 aaKnown RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 HSD17B3P37058 310 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 RASGRF1Q13972 1273 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 TTMPQ5BVD1 217 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 C10orf76Q5T2E6 689 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PHLDB3Q6NSJ2 640 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 SLC30A9Q6PML9 568 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ENAHQ8N8S7 591 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PROCA1Q8NCQ7 364 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 CASKIN2Q8WXE0 1202 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 AZI2Q9H6S1 392 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 MLXIPLQ9NP71 852 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 HOMER2Q9NSB8 354 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 HDAC9Q9UKV0 1011 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PLAGL2Q9UPG8 496 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 NIP7Q9Y221 180 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 COL15A1P39059 1388 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PASKQ96RG2 1323 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 OVOS2A0A0G2JMS6 1433 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 FCER1AP12319 257 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 IL9RQ01113 521 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 BYSLQ13895 437 aaKnown RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 NTRK3Q16288 839 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 LRRC23Q53EV4 343 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 AGBL2Q5U5Z8 902 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PDXDC1Q6P996 788 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 TRMT1LQ7Z2T5 733 aaKnown RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 TRPM8Q7Z2W7 1104 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 GPBP1Q86WP2 473 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 PPP1R14CQ8TAE6 165 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 WDR66Q8TBY9 1149 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 RAPGEF5Q92565 580 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 KIF9Q9HAQ2 790 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 ETNK1Q9HBU6 452 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 IRAK4Q9NWZ3 460 aa8.05□□□□□ -1.12
HDAC9-202ENST00000405010 NOC2LQ9Y3T9 749 aaKnown RBP8.05□□□□□ -1.12
HDAC9-202ENST00000405010 WDR17Q8IZU2 1322 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 GSG1L2A8MUP6 293 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 FANCGO15287 622 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 ANP32DO95626 131 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 GOLGA8HP0CJ92 632 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 TROVE2P10155 538 aaKnown RBP eCLIP8.04□□□□□ -1.12
HDAC9-202ENST00000405010 SKIP12755 728 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 NR2F2P24468 414 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 MRPL12P52815 198 aaKnown RBP8.04□□□□□ -1.12
HDAC9-202ENST00000405010 ZNF449Q6P9G9 518 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 C3orf20Q8ND61 904 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 MDM1Q8TC05 714 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 MTA3Q9BTC8 594 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 DDX23Q9BUQ8 820 aaKnown RBP8.04□□□□□ -1.12
HDAC9-202ENST00000405010 OSBPL1AQ9BXW6 950 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 STK17AQ9UEE5 414 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 DDX20Q9UHI6 824 aaKnown RBP8.04□□□□□ -1.12
HDAC9-202ENST00000405010 FRMD4BQ9Y2L6 1034 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 PCDH11XQ9BZA7 1347 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 PCDH11YQ9BZA8 1340 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 SSU72P8A0A1W2PR75 194 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 KLRF2D3W0D1 207 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 PCP11498 1178 aaKnown RBP8.04□□□□□ -1.12
HDAC9-202ENST00000405010 CHN1P15882 459 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 LRRC14Q15048 493 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 ARHGEF18Q6ZSZ5 1173 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 YTHDF3Q7Z739 585 aaKnown RBP8.04□□□□□ -1.12
HDAC9-202ENST00000405010 CREG2Q8IUH2 290 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 ZBTB10Q96DT7 871 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 LZTS2Q9BRK4 669 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 PHF20Q9BVI0 1012 aa8.04□□□□□ -1.12
HDAC9-202ENST00000405010 NT5C3AQ9H0P0 336 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms