RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 ATP9AO75110 1047 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 MED24O75448 989 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 ALDH5A1P51649 535 aaPredicted RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 PDE4DQ08499 809 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 ITGB3BPQ13352 177 aaPredicted RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 CTTNQ14247 550 aaKnown RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 MCM6Q14566 821 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 STXBP2Q15833 593 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 SV2BQ7L1I2 683 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 KCNK18Q7Z418 384 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 NLRX1Q86UT6 975 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 CATSPER3Q86XQ3 398 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 FAM200AQ8TCP9 573 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 LARP4BQ92615 738 aaKnown RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 EIF2AK1Q9BQI3 630 aaKnown RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 UNC45AQ9H3U1 944 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 AGO4Q9HCK5 861 aaKnown RBP4.16□□□□□ -1.74
RTN4-208ENST00000404909 LOC285556D6RIA3 1793 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 ASTN1O14525 1302 aa4.16□□□□□ -1.74
RTN4-208ENST00000404909 SOWAHBA6NEL2 793 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 BECN2A8MW95 431 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 GTPBP6O43824 516 aaPredicted RBP4.15□□□□□ -1.74
RTN4-208ENST00000404909 RGS20O76081 388 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 SLC10A3P09131 477 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 COPB2P35606 906 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 ASIC1P78348 528 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 RAD51AP2Q09MP3 1159 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 DPYDQ12882 1025 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 GNPTABQ3T906 1256 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 DYMQ7RTS9 669 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 SH3RF1Q7Z6J0 888 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 SMYD4Q8IYR2 804 aaPredicted RBP4.15□□□□□ -1.74
RTN4-208ENST00000404909 DNERQ8NFT8 737 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 CCDC102AQ96A19 550 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 NAT10Q9H0A0 1025 aaKnown RBP4.15□□□□□ -1.74
RTN4-208ENST00000404909 NT5C3AQ9H0P0 336 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 CBX8Q9HC52 389 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 TUBE1Q9UJT0 475 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 MAN1B1Q9UKM7 699 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 FRMPD4Q14CM0 1322 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 KDM3AQ9Y4C1 1321 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 BCRP11274 1271 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 IDEP14735 1019 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 ADORA2AP29274 412 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 NLRP12P59046 1061 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 PSMC6P62333 389 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 AMPD3Q01432 767 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 PPP2R5CQ13362 524 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 KLHL10Q6JEL2 608 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 XRRA1Q6P2D8 792 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 MIER3Q7Z3K6 550 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 IFNL1Q8IU54 200 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 ELOA2Q8IYF1 753 aaPredicted RBP4.15□□□□□ -1.74
RTN4-208ENST00000404909 FAM133AQ8N9E0 248 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 ZNF784Q8NCA9 323 aaPredicted RBP4.15□□□□□ -1.74
RTN4-208ENST00000404909 BANK1Q8NDB2 785 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 PIGOQ8TEQ8 1089 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 ANP32BQ92688 251 aaKnown RBP4.15□□□□□ -1.74
RTN4-208ENST00000404909 RAD54LQ92698 747 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 DYDC2Q96IM9 177 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 INPP4AQ96PE3 977 aaPredicted RBP4.15□□□□□ -1.74
RTN4-208ENST00000404909 IWS1Q96ST2 819 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 RIT2Q99578 217 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 BCAS3Q9H6U6 928 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 TBC1D22BQ9NU19 505 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 BLOC1S4Q9NUP1 217 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 KBTBD4Q9NVX7 518 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 STK17AQ9UEE5 414 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 DNM3Q9UQ16 869 aa4.15□□□□□ -1.74
RTN4-208ENST00000404909 FAM155AB1AL88 458 aaPredicted RBP4.15□□□□□ -1.75
RTN4-208ENST00000404909 GOLGA6L19H0YKK7 550 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 ZBTB39O15060 712 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 DHX15O43143 795 aaKnown RBP4.15□□□□□ -1.75
RTN4-208ENST00000404909 EIF3JO75822 258 aaKnown RBP4.15□□□□□ -1.75
RTN4-208ENST00000404909 RPN1P04843 607 aaKnown RBP4.15□□□□□ -1.75
RTN4-208ENST00000404909 KRT18P05783 430 aaKnown RBP4.15□□□□□ -1.75
RTN4-208ENST00000404909 PLA2G4BP0C869 781 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 SPATA31C1P0DKV0 1188 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 BMP6P22004 513 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 RPA1P27694 616 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 CACNB1Q02641 598 aaPredicted RBP4.15□□□□□ -1.75
RTN4-208ENST00000404909 SREBF2Q12772 1141 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 FAM110CQ1W6H9 321 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 TMEM119Q4V9L6 283 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 NIPA1Q7RTP0 329 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 GPR142Q7Z601 462 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 DPP9Q86TI2 863 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 GPRASP2Q96D09 838 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 MPHOSPH6Q99547 160 aaKnown RBP4.15□□□□□ -1.75
RTN4-208ENST00000404909 CUEDC2Q9H467 287 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 ZHX3Q9H4I2 956 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 MAPK8IP1Q9UQF2 711 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 BRCA2P51587 3418 aa4.15□□□□□ -1.75
RTN4-208ENST00000404909 B4DLN1 442 aa4.14□□□□□ -1.75
RTN4-208ENST00000404909 AOC2O75106 756 aa4.14□□□□□ -1.75
RTN4-208ENST00000404909 SLITRK3O94933 977 aa4.14□□□□□ -1.75
RTN4-208ENST00000404909 SARSP49591 514 aaKnown RBP4.14□□□□□ -1.75
RTN4-208ENST00000404909 SEMA3FQ13275 785 aa4.14□□□□□ -1.75
RTN4-208ENST00000404909 NT5DC1Q5TFE4 455 aa4.14□□□□□ -1.75
RTN4-208ENST00000404909 CYFIP1Q7L576 1253 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms