RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
LINC00339-201ENST00000404210 SPATA32Q96LK8 384 aa13.92□□□□□ -0.18
LINC00339-201ENST00000404210 ZHX1Q9UKY1 873 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-201ENST00000404210 PCDHA12Q9UN75 941 aa13.92□□□□□ -0.18
LINC00339-201ENST00000404210 Q9Y3F1 56 aa13.92□□□□□ -0.18
LINC00339-201ENST00000404210 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
LINC00339-201ENST00000404210 ARIH2O95376 493 aa13.91□□□□□ -0.18
LINC00339-201ENST00000404210 ADCYAP1R1P41586 468 aa13.91□□□□□ -0.18
LINC00339-201ENST00000404210 TNFAIP2Q03169 654 aa13.91□□□□□ -0.18
LINC00339-201ENST00000404210 TRIM32Q13049 653 aa13.91□□□□□ -0.18
LINC00339-201ENST00000404210 ITGB3BPQ13352 177 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-201ENST00000404210 CSPP1Q1MSJ5 1256 aa13.91□□□□□ -0.18
LINC00339-201ENST00000404210 FBXO46Q6PJ61 603 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-201ENST00000404210 POTEHQ6S545 545 aa13.91□□□□□ -0.18
LINC00339-201ENST00000404210 TRPV1Q8NER1 839 aa13.91□□□□□ -0.18
LINC00339-201ENST00000404210 LEO1Q8WVC0 666 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-201ENST00000404210 SDF4Q9BRK5 362 aa13.91□□□□□ -0.18
LINC00339-201ENST00000404210 TEKT3Q9BXF9 490 aa13.91□□□□□ -0.18
LINC00339-201ENST00000404210 TTC12Q9H892 705 aaPredicted RBP13.91□□□□□ -0.18
LINC00339-201ENST00000404210 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-201ENST00000404210 SEPT4O43236 478 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 GAS7O60861 476 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 INHAP05111 366 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
LINC00339-201ENST00000404210 AKR1A1P14550 325 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 SMPD1P17405 629 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 MARCKSP29966 332 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-201ENST00000404210 TECP42680 631 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 FXR2P51116 673 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC00339-201ENST00000404210 LAMC2Q13753 1193 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 IL17AQ16552 155 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 TMEM266Q2M3C6 531 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 CELF3Q5SZQ8 465 aaKnown RBP13.9□□□□□ -0.18
LINC00339-201ENST00000404210 LRCH2Q5VUJ6 765 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 B3GNT9Q6UX72 402 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 GBP4Q96PP9 640 aa13.9□□□□□ -0.18
LINC00339-201ENST00000404210 FBXO2Q9UK22 296 aaPredicted RBP13.9□□□□□ -0.18
LINC00339-201ENST00000404210 GNEQ9Y223 722 aaKnown RBP13.9□□□□□ -0.18
LINC00339-201ENST00000404210 ELP1O95163 1332 aa13.9□□□□□ -0.19
LINC00339-201ENST00000404210 CUTAO60888 179 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 GGPS1O95749 300 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 GH1P01241 217 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 UBA1P22314 1058 aaKnown RBP13.89□□□□□ -0.19
LINC00339-201ENST00000404210 LONP1P36776 959 aaKnown RBP13.89□□□□□ -0.19
LINC00339-201ENST00000404210 KRT76Q01546 638 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 PPP2R5CQ13362 524 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 ZNF746Q6NUN9 644 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-201ENST00000404210 METTL7BQ6UX53 244 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 CYFIP1Q7L576 1253 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 DHX37Q8IY37 1157 aaKnown RBP13.89□□□□□ -0.19
LINC00339-201ENST00000404210 IGSF22Q8N9C0 903 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 KRI1Q8N9T8 703 aaKnown RBP13.89□□□□□ -0.19
LINC00339-201ENST00000404210 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
LINC00339-201ENST00000404210 GJA10Q969M2 543 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 EMID1Q96A84 441 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-201ENST00000404210 UIMC1Q96RL1 719 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 RAB34Q9BZG1 259 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 MLXIPQ9HAP2 919 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 HMX1Q9NP08 348 aaPredicted RBP13.89□□□□□ -0.19
LINC00339-201ENST00000404210 PKD2L1Q9P0L9 805 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 SLC9A2Q9UBY0 812 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 PCDHA7Q9UN72 937 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 STK24Q9Y6E0 443 aa13.89□□□□□ -0.19
LINC00339-201ENST00000404210 VWA3AA6NCI4 1184 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 DUSP11O75319 330 aaKnown RBP13.88□□□□□ -0.19
LINC00339-201ENST00000404210 FARP2O94887 1054 aaPredicted RBP13.88□□□□□ -0.19
LINC00339-201ENST00000404210 ATG7O95352 703 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 CNGA1P29973 690 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 CCND3P30281 292 aaPredicted RBP13.88□□□□□ -0.19
LINC00339-201ENST00000404210 SLC9C1Q4G0N8 1177 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 TMEM63BQ5T3F8 832 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 ADALQ6DHV7 355 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 TMEM87AQ8NBN3 555 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 RDM1Q8NG50 284 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 COPS5Q92905 334 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 AK8Q96MA6 479 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 BCAS3Q9H6U6 928 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 GDPD2Q9HCC8 539 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 JPH1Q9HDC5 661 aaPredicted RBP13.88□□□□□ -0.19
LINC00339-201ENST00000404210 TCEAL9Q9UHQ7 104 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 VAV3Q9UKW4 847 aa13.88□□□□□ -0.19
LINC00339-201ENST00000404210 DOCK5Q9H7D0 1870 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 DYNC1LI2O43237 492 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-201ENST00000404210 MSCO60682 206 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 SFNP31947 248 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 ME1P48163 572 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 SPIRE1Q08AE8 756 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 EPHA7Q15375 998 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 AXDND1Q5T1B0 1012 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-201ENST00000404210 SMAP1Q8IYB5 467 aaPredicted RBP13.87□□□□□ -0.19
LINC00339-201ENST00000404210 SH3TC2Q8TF17 1288 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 SEPT1Q8WYJ6 367 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 CLIC6Q96NY7 704 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 UNC45AQ9H3U1 944 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 LRWD1Q9UFC0 647 aa13.87□□□□□ -0.19
LINC00339-201ENST00000404210 DDX39AO00148 427 aaKnown RBP13.86□□□□□ -0.19
LINC00339-201ENST00000404210 ADCY6O43306 1168 aa13.86□□□□□ -0.19
LINC00339-201ENST00000404210 CCNE2O96020 404 aa13.86□□□□□ -0.19
LINC00339-201ENST00000404210 RARBP10826 455 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms