RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 SEC14L1Q92503 715 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 KCNK12Q9HB15 430 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 DBR1Q9UK59 544 aaKnown RBP6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 DSEQ9UL01 958 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 TELO2Q9Y4R8 837 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 LAMC3Q9Y6N6 1575 aa6.97□□□□□ -1.29
HMGB3P19-201ENST00000403971 PTPDC1A2A3K4 754 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 KRIT1O00522 736 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 HGSO14964 777 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 TADA3O75528 432 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 KRT37O76014 449 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 IRAK1P51617 712 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 STRN3Q13033 797 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 PLEKHN1Q494U1 663 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 DDX46Q7L014 1031 aaKnown RBP6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 MILR1Q7Z6M3 343 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 AFAP1L2Q8N4X5 818 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 C2orf69Q8N8R5 385 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 CHST14Q8NCH0 376 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 UHMK1Q8TAS1 419 aaKnown RBP6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 PEX11GQ96HA9 241 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 AP5M1Q9H0R1 490 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 CABP5Q9NP86 173 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 CFTRP13569 1480 aa6.96□□□□□ -1.3
HMGB3P19-201ENST00000403971 RBM10P98175 930 aaKnown RBP6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 NFKB2Q00653 900 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 NR1I3Q14994 352 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 MPZL3Q6UWV2 235 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 ZNF605Q86T29 641 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 IRF2BP1Q8IU81 584 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 ARRDC4Q8NCT1 418 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 ORAI3Q9BRQ5 295 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 TMX1Q9H3N1 280 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 H2AFY2Q9P0M6 372 aaPredicted RBP6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 MYOTQ9UBF9 498 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 B4GALT6Q9UBX8 382 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 NUDT5Q9UKK9 219 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 SRPK3Q9UPE1 567 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 PCDHB4Q9Y5E5 795 aa6.95□□□□□ -1.3
HMGB3P19-201ENST00000403971 TCRBV5S2A0A599 114 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 F2P00734 622 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 YBX3P16989 372 aaKnown RBP eCLIP6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 MAPKAPK2P49137 400 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 DSG1Q02413 1049 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 GRIN1Q05586 938 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 TUSC3Q13454 348 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 CHRNA2Q15822 529 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 CPZQ66K79 652 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 HHIPL2Q6UWX4 724 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 PRR23BQ6ZRT6 265 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 TMC6Q7Z403 805 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 ANKLE2Q86XL3 938 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 NOSTRINQ8IVI9 506 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 ZCRB1Q8TBF4 217 aaKnown RBP6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 PANK1Q8TE04 598 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 CLEC4DQ8WXI8 215 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 DIRC2Q96SL1 478 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 SMOC1Q9H4F8 434 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 ASH2LQ9UBL3 628 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 ZNF652Q9Y2D9 606 aa6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P19-201ENST00000403971 SLC12A8A0AV02 714 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 SCDO00767 359 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 ATP2A2P16615 1042 aaKnown RBP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 JUNBP17275 347 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 TAL1P17542 331 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 VIPR1P32241 457 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 ID4P47928 161 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 CDKN1CP49918 316 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 SCNN1BP51168 640 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 EVA1CP58658 441 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 YBX1P67809 324 aaKnown RBP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 SEC23AQ15436 765 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 CREB3L3Q68CJ9 461 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 ZC3H14Q6PJT7 736 aaKnown RBP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 LHFPL2Q6ZUX7 228 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 KCTD1Q719H9 257 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 OTOP1Q7RTM1 612 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 DDX42Q86XP3 938 aaKnown RBP eCLIP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 OR2W6PQ8NHA6 318 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 CHTF18Q8WVB6 975 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 GPR101Q96P66 508 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 THG1LQ9NWX6 298 aaKnown RBP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 ZKSCAN5Q9Y2L8 839 aa6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 NOP58Q9Y2X3 529 aaKnown RBP6.93□□□□□ -1.3
HMGB3P19-201ENST00000403971 hCG_2014768A0A024R1R8 64 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 NEMP1O14524 444 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 GAS7O60861 476 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 EYA4O95677 639 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 ZBTB48P10074 688 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 IBSPP21815 317 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 ADCYAP1R1P41586 468 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 ZNF200P98182 395 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 IRF9Q00978 393 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 DHCR24Q15392 516 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 CYP4F22Q6NT55 531 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 EP400NLQ6ZTU2 488 aa6.92□□□□□ -1.3
HMGB3P19-201ENST00000403971 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms