RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 PCDHB13Q9Y5F0 798 aa10.07□□□□□ -0.8
HPS4-203ENST00000402105 FER1L4A9Z1Z3 1794 aa10.07□□□□□ -0.8
HPS4-203ENST00000402105 AKAP11Q9UKA4 1901 aa10.07□□□□□ -0.8
HPS4-203ENST00000402105 CLIC2O15247 247 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 SHOX2O60902 331 aaPredicted RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 ITGA4P13612 1032 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 PDE6BP35913 854 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 STAT3P40763 770 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 MAGOHP61326 146 aaKnown RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 FKBP3Q00688 224 aaKnown RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 PLS1Q14651 629 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 DDB1Q16531 1140 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 PTGISQ16647 500 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 C12orf60Q5U649 245 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 CENPPQ6IPU0 288 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 UNC13DQ70J99 1090 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 TEX11Q8IYF3 940 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 MYCBPAPQ8TBZ2 947 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 U2AF1L4Q8WU68 220 aaKnown RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 MAGOHBQ96A72 148 aaKnown RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 CEP95Q96GE4 821 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 BLOC1S4Q9NUP1 217 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 BSDC1Q9NW68 430 aaPredicted RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 FBXL5Q9UKA1 691 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 FLT3P36888 993 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 SNAP25P60880 206 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 CYP4A11Q02928 519 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 DHX9Q08211 1270 aaKnown RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 GPBP1Q86WP2 473 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 SH3GL2Q99962 352 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 HAUS2Q9NVX0 235 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 CHORDC1Q9UHD1 332 aaPredicted RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 ZNF804BA4D1E1 1349 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 FLT1P17948 1338 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 DCDC2CA8MYV0 355 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 TLR2O60603 784 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 SERPING1P05155 500 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 KRT13P13646 458 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 HSD17B3P37058 310 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 ZNF211Q13398 564 aaPredicted RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 NBPF9Q3BBW0 867 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 PNMA8AQ86V59 439 aaPredicted RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 CCDC25Q86WR0 208 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 RDH13Q8NBN7 331 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 MGARPQ8TDB4 240 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 BAP1Q92560 729 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 AK8Q96MA6 479 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 PNMA5Q96PV4 448 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 PURBQ96QR8 312 aaKnown RBP10.06□□□□□ -0.8
HPS4-203ENST00000402105 BAIAP2L1Q9UHR4 511 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 PCDHA12Q9UN75 941 aa10.06□□□□□ -0.8
HPS4-203ENST00000402105 TTI1O43156 1089 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 SART1O43290 800 aaKnown RBP10.05□□□□□ -0.8
HPS4-203ENST00000402105 PDHBP11177 359 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 ADCY7P51828 1080 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 ERVK-9P63128 1117 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 COASYQ13057 564 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 ECM1Q16610 540 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 FAM182BQ5T319 152 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 SETDB2Q96T68 719 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 SPEF2Q9C093 1822 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 NID2Q14112 1375 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 POTECB2RU33 542 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 UBAP1LF5GYI3 381 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 MYL1P05976 194 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 NR2F2P24468 414 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 PTK2Q05397 1052 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 ADCY1Q08828 1119 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 PABPC4Q13310 644 aaKnown RBP eCLIP10.05□□□□□ -0.8
HPS4-203ENST00000402105 TBC1D9BQ66K14 1250 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 CHADLQ6NUI6 762 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 KCTD1Q719H9 257 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 CCDC13Q8IYE1 715 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 TRIM51Q9BSJ1 452 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 DDX25Q9UHL0 483 aaKnown RBP10.05□□□□□ -0.8
HPS4-203ENST00000402105 ATP6V0A2Q9Y487 856 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 A0A1W2PQJ5 194 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 NF2P35240 595 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 CDK8P49336 464 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 KCNH2Q12809 1159 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 QPCTQ16769 361 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 TTBK2Q6IQ55 1244 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 SLC30A10Q6XR72 485 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 ZSCAN29Q8IWY8 852 aaPredicted RBP10.05□□□□□ -0.8
HPS4-203ENST00000402105 RAD54LQ92698 747 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 CYFIP2Q96F07 1278 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 CUEDC2Q9H467 287 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 CXorf56Q9H5V9 222 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 SH3GLB2Q9NR46 395 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 KLC4Q9NSK0 619 aa10.05□□□□□ -0.8
HPS4-203ENST00000402105 BAZ2AQ9UIF9 1905 aaKnown RBP10.05□□□□□ -0.8
HPS4-203ENST00000402105 TJP1Q07157 1748 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 GRID2IPA4D2P6 1211 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 EIF4E1BA6NMX2 242 aaKnown RBP10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP17L15C9J2P7 530 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP17L13C9JLJ4 530 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP17L11C9JVI0 530 aa10.04□□□□□ -0.8
HPS4-203ENST00000402105 USP17L18D6R9N7 530 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms