RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 BMP2KQ9NSY1 1161 aaPredicted RBP18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 KIAA1551Q9HCM1 1747 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 CASZ1Q86V15 1759 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 PLA2G4BP0C869 781 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 GYS1P13807 737 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 PLCG2P16885 1265 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 UBXN2AP68543 259 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 LRRC31Q6UY01 552 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 GPATCH11Q8N954 259 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 CUL5Q93034 780 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 ALS2CR12Q96Q35 445 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 ZC3H12CQ9C0D7 883 aaKnown RBP18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 CENPHQ9H3R5 247 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 COL4A3BPQ9Y5P4 624 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 ROBO3Q96MS0 1386 aa18.8■□□□□ 0.6
SNRNP70-202ENST00000401730 CLIC2O15247 247 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 KLRC1P26715 233 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 ADAM9Q13443 819 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 TTC31Q49AM3 519 aaPredicted RBP18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 CCDC70Q6NSX1 233 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 SH2D3CQ8N5H7 860 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 CYP2W1Q8TAV3 490 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 DNAJC19Q96DA6 116 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 RBM17Q96I25 401 aaKnown RBP18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.79■□□□□ 0.66e-7■■■■■ 40.4
SNRNP70-202ENST00000401730 PNMA6FA0A0J9YX94 578 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 AGPSO00116 658 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 PRPF6O94906 941 aaKnown RBP18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 ATP1A2P50993 1020 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 KIAA0753Q2KHM9 967 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 PDXDC1Q6P996 788 aa18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 TSEN2Q8NCE0 465 aaKnown RBP18.79■□□□□ 0.6
SNRNP70-202ENST00000401730 A0A087X0T9 212 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 MED24O75448 989 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 FAM228BP0C875 321 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 SLC9A1P19634 815 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 PAFAH1B1P43034 410 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 NOP2P46087 812 aaKnown RBP18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 SFMBT2Q5VUG0 894 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 CCDC84Q86UT8 332 aaPredicted RBP18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 KSR1Q8IVT5 923 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 TLR10Q9BXR5 811 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 MAGEF1Q9HAY2 307 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 STK17AQ9UEE5 414 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 RSPH10B2B2RC85 870 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 RSPH10BP0C881 870 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 FXR2P51116 673 aaKnown RBP eCLIP18.78■□□□□ 0.61e-9■□□□□ 10
SNRNP70-202ENST00000401730 FKBP3Q00688 224 aaKnown RBP18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 QRICH1Q2TAL8 776 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 GJB7Q6PEY0 223 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 CCDC88AQ3V6T2 1871 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 CHMP2AO43633 222 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 MRPL12P52815 198 aaKnown RBP18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 DDR1Q08345 913 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 KCNA1Q09470 495 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 C8orf74Q6P047 294 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 NFU1Q9UMS0 254 aa18.78■□□□□ 0.6
SNRNP70-202ENST00000401730 PVALEFA0A1B0GWK0 134 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 GOLGA6CA6NDK9 693 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 TMCO5BA8MYB1 307 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 GOLGA6DP0CG33 693 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 GUCY2DQ02846 1103 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 KLHL30Q0D2K2 578 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 KRT12Q99456 494 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 EMILIN3Q9NT22 766 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 GOLGA6AQ9NYA3 693 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 HYOU1Q9Y4L1 999 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 NOL4O94818 638 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 FAM153BP0C7A2 387 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 IL1R1P14778 569 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 SHMT1P34896 483 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 CARSP49589 748 aaKnown RBP18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 FAM153CQ494X1 144 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 SLC9C1Q4G0N8 1177 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 ASPRV1Q53RT3 343 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 KLHDC7AQ5VTJ3 777 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 PACS2Q86VP3 889 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 ARL8AQ96BM9 186 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 NOX5Q96PH1 765 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 FAM153AQ9UHL3 310 aa18.77■□□□□ 0.6
SNRNP70-202ENST00000401730 KRT14P02533 472 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 NR2F2P24468 414 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 HGSNATQ68CP4 663 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 CDC42EP5Q6NZY7 148 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 P2RX7Q99572 595 aaKnown RBP18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 TSGA10Q9BZW7 698 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 EPB41L5Q9HCM4 733 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 LAMB2P55268 1798 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 TNRC6CQ9HCJ0 1690 aaKnown RBP18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 UBAP1LF5GYI3 381 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 ZBTB39O15060 712 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 IVLP07476 585 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 GLI1P08151 1106 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 PLS1Q14651 629 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 SCFD1Q8WVM8 642 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 PURBQ96QR8 312 aaKnown RBP18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 RIC8AQ9NPQ8 531 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 PCDHB13Q9Y5F0 798 aa18.76■□□□□ 0.59
SNRNP70-202ENST00000401730 ZBTB5O15062 677 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms