RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 PSMC6P62333 389 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 SETQ01105 290 aaPredicted RBP13.66□□□□□ -0.22
CLIP4-203ENST00000401617 LRRC63Q05C16 580 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 CEP135Q66GS9 1140 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 NIPA1Q7RTP0 329 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 PPFIBP1Q86W92 1011 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 CCDC65Q8IXS2 484 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 MYRIPQ8NFW9 859 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 ZKSCAN4Q969J2 545 aaPredicted RBP13.66□□□□□ -0.22
CLIP4-203ENST00000401617 PPP1R13BQ96KQ4 1090 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 WRNIP1Q96S55 665 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 TANGO6Q9C0B7 1094 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 TUFT1Q9NNX1 390 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 GGA3Q9NZ52 723 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 DNM3Q9UQ16 869 aa13.66□□□□□ -0.22
CLIP4-203ENST00000401617 FLOT1O75955 427 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 TRIM14Q14142 442 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 ZCWPW2Q504Y3 356 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 FAM26FQ5R3K3 315 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 PRAMEF18Q5VWM3 479 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 SAMD1Q6SPF0 538 aaPredicted RBP13.65□□□□□ -0.22
CLIP4-203ENST00000401617 MB21D1Q8N884 522 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 CCDC51Q96ER9 411 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 MXRA8Q9BRK3 442 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 PICK1Q9NRD5 415 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 TRMT1Q9NXH9 659 aaKnown RBP13.65□□□□□ -0.22
CLIP4-203ENST00000401617 MAGEC2Q9UBF1 373 aaPredicted RBP13.65□□□□□ -0.22
CLIP4-203ENST00000401617 ADAMTS5Q9UNA0 930 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 C19orf81C9J6K1 198 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 KIF2AO00139 706 aaPredicted RBP13.65□□□□□ -0.22
CLIP4-203ENST00000401617 CCP110O43303 1012 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 MFAP3LO75121 409 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 PTPN14Q15678 1187 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 LRCH2Q5VUJ6 765 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 SYTL5Q8TDW5 730 aaPredicted RBP13.65□□□□□ -0.22
CLIP4-203ENST00000401617 CNOT6LQ96LI5 555 aaKnown RBP13.65□□□□□ -0.22
CLIP4-203ENST00000401617 TUBGCP2Q9BSJ2 902 aa13.65□□□□□ -0.22
CLIP4-203ENST00000401617 NAA15Q9BXJ9 866 aaKnown RBP13.65□□□□□ -0.22
CLIP4-203ENST00000401617 RAVER2Q9HCJ3 691 aaKnown RBP13.65□□□□□ -0.22
CLIP4-203ENST00000401617 PAPPA2Q9BXP8 1791 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 VWA5AO00534 786 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 EYA4O95677 639 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 SSBP05455 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLIP4-203ENST00000401617 ARP10275 920 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 GTF2F1P35269 517 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLIP4-203ENST00000401617 DNM2P50570 870 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 UBXN2AP68543 259 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 UBXN1Q04323 297 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 KRT26Q7Z3Y9 468 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 CNGA4Q8IV77 575 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 REXO1L1PQ8IX06 675 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 MYOCDQ8IZQ8 938 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 GLIS3Q8NEA6 775 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 REPS2Q8NFH8 660 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 RIT2Q99578 217 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 PTPRFP10586 1907 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 WDR90Q96KV7 1748 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 NPHP3-ACAD11A0A0J9YXS1 232 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 ZBED4O75132 1171 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 SLITRK3O94933 977 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 FGFR1OPO95684 399 aaKnown RBP13.64□□□□□ -0.23
CLIP4-203ENST00000401617 TUBB4AP04350 444 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 ALAS1P13196 640 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 ITGB5P18084 799 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 CASP14P31944 242 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 FXR1P51114 621 aaKnown RBP eCLIP13.64□□□□□ -0.23
CLIP4-203ENST00000401617 GIT2Q14161 759 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 MIIPQ5JXC2 388 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 LRRC55Q6ZSA7 311 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 CPXCR1Q8N123 301 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 WDR11Q9BZH6 1224 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 PAXBP1Q9Y5B6 917 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 UBIAD1Q9Y5Z9 338 aa13.64□□□□□ -0.23
CLIP4-203ENST00000401617 GAS7O60861 476 aa13.63□□□□□ -0.23
CLIP4-203ENST00000401617 PABPC4Q13310 644 aaKnown RBP eCLIP13.63□□□□□ -0.23
CLIP4-203ENST00000401617 SUPT20HL1Q3ZLR7 823 aa13.63□□□□□ -0.23
CLIP4-203ENST00000401617 PCNX4Q63HM2 1172 aa13.63□□□□□ -0.23
CLIP4-203ENST00000401617 ZNF577Q9BSK1 485 aa13.63□□□□□ -0.23
CLIP4-203ENST00000401617 FHDC1Q9C0D6 1143 aaPredicted RBP13.63□□□□□ -0.23
CLIP4-203ENST00000401617 RGL1Q9NZL6 768 aa13.63□□□□□ -0.23
CLIP4-203ENST00000401617 ZHX2Q9Y6X8 837 aa13.63□□□□□ -0.23
CLIP4-203ENST00000401617 RNF225M0QZC1 329 aaPredicted RBP13.62□□□□□ -0.23
CLIP4-203ENST00000401617 DSG3P32926 999 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 OAZ1P54368 228 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 LRRC41Q15345 812 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 EPHA7Q15375 998 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 ZC3H3Q8IXZ2 948 aaKnown RBP13.62□□□□□ -0.23
CLIP4-203ENST00000401617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.62□□□□□ -0.23
CLIP4-203ENST00000401617 IL31RAQ8NI17 732 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 ATG4CQ96DT6 458 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 FGFBP2Q9BYJ0 223 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 UNC45AQ9H3U1 944 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 AFG3L2Q9Y4W6 797 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 UQCRHLA0A096LP55 91 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 IPO5O00410 1097 aaKnown RBP13.62□□□□□ -0.23
CLIP4-203ENST00000401617 ZSCAN12O43309 604 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 USP2O75604 605 aaPredicted RBP13.62□□□□□ -0.23
CLIP4-203ENST00000401617 UQCRHP07919 91 aa13.62□□□□□ -0.23
CLIP4-203ENST00000401617 TPM1P09493 284 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms