RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 GJB1P08034 283 aa18.05■□□□□ 0.48
HMGA1-204ENST00000401473 CEBPZQ03701 1054 aaKnown RBP18.05■□□□□ 0.48
HMGA1-204ENST00000401473 SF3A1Q15459 793 aaKnown RBP18.05■□□□□ 0.48
HMGA1-204ENST00000401473 CELF3Q5SZQ8 465 aaKnown RBP18.05■□□□□ 0.48
HMGA1-204ENST00000401473 CIZ1Q9ULV3 898 aaPredicted RBP18.05■□□□□ 0.48
HMGA1-204ENST00000401473 FARP2O94887 1054 aaPredicted RBP18.05■□□□□ 0.48
HMGA1-204ENST00000401473 PGK1P00558 417 aa18.05■□□□□ 0.48
HMGA1-204ENST00000401473 ARHGAP1Q07960 439 aa18.05■□□□□ 0.48
HMGA1-204ENST00000401473 HSDL1Q3SXM5 330 aa18.05■□□□□ 0.48
HMGA1-204ENST00000401473 U2AF1L4Q8WU68 220 aaKnown RBP18.05■□□□□ 0.48
HMGA1-204ENST00000401473 SLC5A5Q92911 643 aa18.05■□□□□ 0.48
HMGA1-204ENST00000401473 MYH15Q9Y2K3 1946 aa18.05■□□□□ 0.48
HMGA1-204ENST00000401473 CCDC85CA6NKD9 419 aa18.04■□□□□ 0.48
HMGA1-204ENST00000401473 CTAGE5O15320 804 aa18.04■□□□□ 0.48
HMGA1-204ENST00000401473 PSMD10O75832 226 aa18.04■□□□□ 0.48
HMGA1-204ENST00000401473 RARBP10826 455 aa18.04■□□□□ 0.48
HMGA1-204ENST00000401473 DNM1Q05193 864 aaKnown RBP18.04■□□□□ 0.48
HMGA1-204ENST00000401473 NEDD9Q14511 834 aa18.04■□□□□ 0.48
HMGA1-204ENST00000401473 CALCRLQ16602 461 aa18.04■□□□□ 0.48
HMGA1-204ENST00000401473 DHX37Q8IY37 1157 aaKnown RBP18.04■□□□□ 0.48
HMGA1-204ENST00000401473 MYADML2A6NDP7 307 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 TBX3O15119 743 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 NKRFO15226 690 aaKnown RBP eCLIP18.03■□□□□ 0.481e-6■□□□□ 10.1
HMGA1-204ENST00000401473 SGPL1O95470 568 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 PTPAQ15257 358 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 METTL7BQ6UX53 244 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 TLK2Q86UE8 772 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 FAM20AQ96MK3 541 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 TMEM106CQ9BVX2 250 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 MLXIPQ9HAP2 919 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 CHMP5Q9NZZ3 219 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 Q9Y3F1 56 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 DDX39AO00148 427 aaKnown RBP18.03■□□□□ 0.48
HMGA1-204ENST00000401473 ADAMTS4O75173 837 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 GH1P01241 217 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 GJA8P48165 433 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 ORC2Q13416 577 aaPredicted RBP18.03■□□□□ 0.48
HMGA1-204ENST00000401473 IL17AQ16552 155 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 EMID1Q96A84 441 aaPredicted RBP18.03■□□□□ 0.48
HMGA1-204ENST00000401473 RIT2Q99578 217 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 CRISPLD2Q9H0B8 497 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 XPNPEP3Q9NQH7 507 aa18.03■□□□□ 0.48
HMGA1-204ENST00000401473 NFASCO94856 1347 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 SYNRGQ9UMZ2 1314 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 MSCO60682 206 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 CCNE2O96020 404 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 TXKP42681 527 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 GJA9P57773 515 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 ATP2C1P98194 919 aaPredicted RBP18.02■□□□□ 0.48
HMGA1-204ENST00000401473 SP4Q02446 784 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 LAMC2Q13753 1193 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 LRCH2Q5VUJ6 765 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 B3GNT9Q6UX72 402 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 OR6J1Q8NGC5 347 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 AFG1LQ8WV93 481 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 TTC12Q9H892 705 aaPredicted RBP18.02■□□□□ 0.48
HMGA1-204ENST00000401473 TBC1D22BQ9NU19 505 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 PCDHA12Q9UN75 941 aa18.02■□□□□ 0.48
HMGA1-204ENST00000401473 EN2P19622 333 aaPredicted RBP18.01■□□□□ 0.47
HMGA1-204ENST00000401473 BEX3Q00994 111 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 SPIRE1Q08AE8 756 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 GIMAP8Q8ND71 665 aaPredicted RBP18.01■□□□□ 0.47
HMGA1-204ENST00000401473 SPATA33Q96N06 139 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 SDF4Q9BRK5 362 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 JPH1Q9HDC5 661 aaPredicted RBP18.01■□□□□ 0.47
HMGA1-204ENST00000401473 SLC9A2Q9UBY0 812 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 VAV3Q9UKW4 847 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 OGDHLQ9ULD0 1010 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 FRMPD3Q5JV73 1810 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 A6NJR5 290 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 GAS7O60861 476 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 OR52Z1P0C646 297 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 C6orf222P0C671 652 aaPredicted RBP18.01■□□□□ 0.47
HMGA1-204ENST00000401473 SOX10P56693 466 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 NKX3-2P78367 333 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 SLFN12Q8IYM2 578 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 LINC00301Q8NCQ3 95 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 KLHDC9Q8NEP7 349 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 UPF3AQ9H1J1 476 aaKnown RBP18.01■□□□□ 0.47
HMGA1-204ENST00000401473 POLR3EQ9NVU0 708 aa18.01■□□□□ 0.47
HMGA1-204ENST00000401473 WDR81Q562E7 1941 aa18■□□□□ 0.47
HMGA1-204ENST00000401473 GSTTP1A0A1W2PQM5 241 aa18■□□□□ 0.47
HMGA1-204ENST00000401473 MARCH6O60337 910 aa18■□□□□ 0.47
HMGA1-204ENST00000401473 NASPP49321 788 aaPredicted RBP18■□□□□ 0.47
HMGA1-204ENST00000401473 MNX1P50219 401 aaPredicted RBP18■□□□□ 0.47
HMGA1-204ENST00000401473 SLC39A14Q15043 492 aa18■□□□□ 0.47
HMGA1-204ENST00000401473 CCSAPQ6IQ19 270 aaPredicted RBP18■□□□□ 0.47
HMGA1-204ENST00000401473 PPTC7Q8NI37 304 aa18■□□□□ 0.47
HMGA1-204ENST00000401473 GPR20Q99678 358 aa18■□□□□ 0.47
HMGA1-204ENST00000401473 AP5M1Q9H0R1 490 aa18■□□□□ 0.47
HMGA1-204ENST00000401473 UNC45AQ9H3U1 944 aa18■□□□□ 0.47
HMGA1-204ENST00000401473 EML1O00423 815 aa17.99■□□□□ 0.47
HMGA1-204ENST00000401473 BAG4O95429 457 aaKnown RBP17.99■□□□□ 0.47
HMGA1-204ENST00000401473 TFRCP02786 760 aaKnown RBP17.99■□□□□ 0.47
HMGA1-204ENST00000401473 MARCKSP29966 332 aaPredicted RBP17.99■□□□□ 0.47
HMGA1-204ENST00000401473 TECP42680 631 aa17.99■□□□□ 0.47
HMGA1-204ENST00000401473 ACTR2P61160 394 aa17.99■□□□□ 0.47
HMGA1-204ENST00000401473 GRIN1Q05586 938 aa17.99■□□□□ 0.47
HMGA1-204ENST00000401473 LRRC41Q15345 812 aa17.99■□□□□ 0.47
HMGA1-204ENST00000401473 FSCN1Q16658 493 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms