RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 SH3GL2Q99962 352 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 FAM129AQ9BZQ8 928 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 MRPL44Q9H9J2 332 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 ABCC2Q92887 1545 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 GSNP06396 782 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 SCG2P13521 617 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 OR9Q1Q8NGQ5 310 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 HIC2Q96JB3 615 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 DNAJC7Q99615 494 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 YIPF2Q9BWQ6 316 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 LRWD1Q9UFC0 647 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 TRPC6Q9Y210 931 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 JAG2Q9Y219 1238 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 PCDHB13Q9Y5F0 798 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 TRAPPC8Q9Y2L5 1435 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 EIF2S1P05198 315 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 PPP6R3Q5H9R7 873 aaPredicted RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 HDDC2Q7Z4H3 204 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 LSM14BQ9BX40 385 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 THAP9Q9H5L6 903 aa9.01□□□□□ -0.97
CHD8-201ENST00000399982 PAPOLBQ9NRJ5 636 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 STX18Q9P2W9 335 aaKnown RBP9.01□□□□□ -0.97
CHD8-201ENST00000399982 C16orf96A6NNT2 1141 aa9□□□□□ -0.97
CHD8-201ENST00000399982 SNUPNO95149 360 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 PDCLQ13371 301 aa9□□□□□ -0.97
CHD8-201ENST00000399982 SLC39A14Q15043 492 aa9□□□□□ -0.97
CHD8-201ENST00000399982 ZBTB33Q86T24 672 aa9□□□□□ -0.97
CHD8-201ENST00000399982 SUGP1Q8IWZ8 645 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 OSBPL3Q9H4L5 887 aa9□□□□□ -0.97
CHD8-201ENST00000399982 FAM207AQ9NSI2 230 aaPredicted RBP9□□□□□ -0.97
CHD8-201ENST00000399982 RWDD2AQ9UIY3 292 aa9□□□□□ -0.97
CHD8-201ENST00000399982 RCOR1Q9UKL0 485 aa9□□□□□ -0.97
CHD8-201ENST00000399982 BLOC1S6Q9UL45 172 aa9□□□□□ -0.97
CHD8-201ENST00000399982 MECOMQ03112 1051 aa9□□□□□ -0.97
CHD8-201ENST00000399982 STX19Q8N4C7 294 aa9□□□□□ -0.97
CHD8-201ENST00000399982 SRPK1Q96SB4 655 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 CPSF3Q9UKF6 684 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 H0Y626 953 aa9□□□□□ -0.97
CHD8-201ENST00000399982 EIF3HO15372 352 aaKnown RBP eCLIP9□□□□□ -0.973e-6■■□□□ 14.2
CHD8-201ENST00000399982 STRNO43815 780 aa9□□□□□ -0.97
CHD8-201ENST00000399982 TRIM16O95361 564 aa9□□□□□ -0.97
CHD8-201ENST00000399982 ZNF174Q15697 407 aa9□□□□□ -0.97
CHD8-201ENST00000399982 MAGOHBQ96A72 148 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 SYNGAP1Q96PV0 1343 aa9□□□□□ -0.97
CHD8-201ENST00000399982 MT-ND3P03897 115 aa9□□□□□ -0.97
CHD8-201ENST00000399982 DNAL1Q4LDG9 190 aa9□□□□□ -0.97
CHD8-201ENST00000399982 KBTBD3Q8NAB2 608 aa9□□□□□ -0.97
CHD8-201ENST00000399982 NUDCD1Q96RS6 583 aa9□□□□□ -0.97
CHD8-201ENST00000399982 NOVA2Q9UNW9 492 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 E2F6O75461 281 aa9□□□□□ -0.97
CHD8-201ENST00000399982 NDUFA10O95299 355 aa9□□□□□ -0.97
CHD8-201ENST00000399982 PSMD2Q13200 908 aa9□□□□□ -0.97
CHD8-201ENST00000399982 SYCP2LQ5T4T6 812 aa9□□□□□ -0.97
CHD8-201ENST00000399982 NUGGCQ68CJ6 796 aa9□□□□□ -0.97
CHD8-201ENST00000399982 ADAT2Q7Z6V5 191 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 SREK1IP1Q8N9Q2 155 aaPredicted RBP9□□□□□ -0.97
CHD8-201ENST00000399982 U2AF1L4Q8WU68 220 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 STMN3Q9NZ72 180 aa9□□□□□ -0.97
CHD8-201ENST00000399982 FRMD4AQ9P2Q2 1039 aaPredicted RBP9□□□□□ -0.97
CHD8-201ENST00000399982 NCF2P19878 526 aaPredicted RBP9□□□□□ -0.97
CHD8-201ENST00000399982 IFNAR2P48551 515 aa9□□□□□ -0.97
CHD8-201ENST00000399982 KRT17Q04695 432 aa9□□□□□ -0.97
CHD8-201ENST00000399982 MED21Q13503 144 aa9□□□□□ -0.97
CHD8-201ENST00000399982 PNOCQ13519 176 aa9□□□□□ -0.97
CHD8-201ENST00000399982 AARS2Q5JTZ9 985 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 CCDC90BQ9GZT6 254 aa9□□□□□ -0.97
CHD8-201ENST00000399982 MCM9Q9NXL9 1143 aa9□□□□□ -0.97
CHD8-201ENST00000399982 POC1B-GALNT4F8VUJ3 575 aa9□□□□□ -0.97
CHD8-201ENST00000399982 BNIP3LO60238 219 aa9□□□□□ -0.97
CHD8-201ENST00000399982 PPP1R37O75864 691 aa9□□□□□ -0.97
CHD8-201ENST00000399982 CDC37Q16543 378 aaPredicted RBP9□□□□□ -0.97
CHD8-201ENST00000399982 HERC4Q5GLZ8 1057 aaPredicted RBP9□□□□□ -0.97
CHD8-201ENST00000399982 CCDC80Q76M96 950 aa9□□□□□ -0.97
CHD8-201ENST00000399982 BZW1Q7L1Q6 419 aaKnown RBP9□□□□□ -0.97
CHD8-201ENST00000399982 KRT77Q7Z794 578 aa9□□□□□ -0.97
CHD8-201ENST00000399982 ZFP69BQ9UJL9 534 aa9□□□□□ -0.97
CHD8-201ENST00000399982 ZNF711Q9Y462 761 aa9□□□□□ -0.97
CHD8-201ENST00000399982 USH1GQ495M9 461 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 PCGF5Q86SE9 256 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 C14orf93Q9H972 538 aaKnown RBP8.99□□□□□ -0.97
CHD8-201ENST00000399982 ATP6V0A4Q9HBG4 840 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 CAB39Q9Y376 341 aaPredicted RBP8.99□□□□□ -0.97
CHD8-201ENST00000399982 REREQ9P2R6 1566 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 CC2D2AQ9P2K1 1620 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 KRT37O76014 449 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 RAD23BP54727 409 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 PSMC1P62191 440 aaKnown RBP8.99□□□□□ -0.97
CHD8-201ENST00000399982 TBL3Q12788 808 aaKnown RBP8.99□□□□□ -0.97
CHD8-201ENST00000399982 TTC6Q86TZ1 520 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 RDH13Q8NBN7 331 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.99□□□□□ -0.97
CHD8-201ENST00000399982 DPH5Q9H2P9 285 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 SLITRK6Q9H5Y7 841 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 SYBUQ9NX95 663 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 WARS2Q9UGM6 360 aaKnown RBP8.99□□□□□ -0.97
CHD8-201ENST00000399982 TRAF3IP3Q9Y228 551 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 ARL2BPQ9Y2Y0 163 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 HAUS5O94927 633 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 SRGAP2BP0DMP2 458 aa8.99□□□□□ -0.97
CHD8-201ENST00000399982 CENPAP49450 140 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 557.6 ms