RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ATXN3P54252 364 aaPredicted RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 KCTD1Q719H9 257 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 CATSPER4Q7RTX7 472 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 SPATS2Q86XZ4 545 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 PDLIM2Q96JY6 352 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 ADCY1Q08828 1119 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 RSBN1LQ6PCB5 846 aaPredicted RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 PDCD6IPQ8WUM4 868 aaKnown RBP11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 MASTLQ96GX5 879 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 ZNF577Q9BSK1 485 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 FBXL21Q9UKT6 434 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 DDAH1O94760 285 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 PDE1BQ01064 536 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 TRIM11Q96F44 468 aa11.95□□□□□ -0.5
CACNA1C-215ENST00000399637 MAST1Q9Y2H9 1570 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 MAGI3Q5TCQ9 1506 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 BRD1O95696 1058 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 BPIFB4P59827 614 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 PTK2Q05397 1052 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 OR8K1Q8NGG5 319 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 CCDC127Q96BQ5 260 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 ZNF518AQ6AHZ1 1483 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 TTI1O43156 1089 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 ZMYND10O75800 440 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 EFCAB13Q8IY85 973 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 SPZ1Q9BXG8 430 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 EVI5O60447 810 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 CPP00450 1065 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 APOEP02649 317 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 KPNA2P52292 529 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 PTPROQ16827 1216 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 APOBEC3FQ8IUX4 373 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 FBXO2Q9UK22 296 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 PTPN22Q9Y2R2 807 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 ZBTB7BO15156 539 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 RPN1P04843 607 aaKnown RBP11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 ADAM9Q13443 819 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 TRIM42Q8IWZ5 723 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 SYNE4Q8N205 404 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 TRIML1Q8N9V2 468 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 DAAM1Q9Y4D1 1078 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 CAPN7Q9Y6W3 813 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 ZHX2Q9Y6X8 837 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 ACTN1P12814 892 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 CPB1P15086 417 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 PTK2BQ14289 1009 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 ATP6V0A1Q93050 837 aa11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 SUCLA2Q9P2R7 463 aaPredicted RBP11.94□□□□□ -0.5
CACNA1C-215ENST00000399637 SGSM2O43147 1006 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 YY1P25490 414 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 SREBF2Q12772 1141 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 MYO1EQ12965 1108 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 ADALQ6DHV7 355 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 DRC3Q9H069 523 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 TBX22Q9Y458 520 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 LUC7L3O95232 432 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 CELF2O95319 508 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 IL9RQ01113 521 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 VEPH1Q14D04 833 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 CERKQ8TCT0 537 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 EIF2AQ9BY44 585 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 RSPH10B2B2RC85 870 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 POC1B-GALNT4F8VUJ3 575 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 MED7O43513 233 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 RSPH10BP0C881 870 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 TFAMQ00059 246 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 CHRNDQ07001 517 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 FBXW10Q5XX13 1052 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 RWDD4Q6NW29 188 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 SH3KBP1Q96B97 665 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 SYTL2Q9HCH5 934 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 LARSQ9P2J5 1176 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 HPCAL4Q9UM19 191 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 MED23Q9ULK4 1368 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 PFKFB1P16118 471 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 TSPY1Q01534 308 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 NKX1-1Q15270 411 aaPredicted RBP11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 CCNYQ8ND76 341 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 CAPS2Q9BXY5 557 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 USP17L12C9JPN9 530 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 USP17L21D6R901 530 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 PMS1P54277 932 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 TMTC3Q6ZXV5 915 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 GAS2L3Q86XJ1 694 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 STAG1Q8WVM7 1258 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 SNX19Q92543 992 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 ZFYVE19Q96K21 471 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 PHACTR3Q96KR7 559 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 GDAP1L1Q96MZ0 367 aa11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 XPO4Q9C0E2 1151 aaKnown RBP11.93□□□□□ -0.5
CACNA1C-215ENST00000399637 LAMC1P11047 1609 aa11.92□□□□□ -0.5
CACNA1C-215ENST00000399637 JAK2O60674 1132 aa11.92□□□□□ -0.5
CACNA1C-215ENST00000399637 CMTR1Q8N1G2 835 aaKnown RBP11.92□□□□□ -0.5
CACNA1C-215ENST00000399637 NT5C1BQ96P26 610 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms