RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 C1orf146Q5VVC0 180 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 CCDC149Q6ZUS6 474 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 NYXQ9GZU5 481 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 CCPG1Q9ULG6 757 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 EFCAB8A8MWE9 144 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 GNAT2P19087 354 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 CABP7Q86V35 215 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 GLG1Q92896 1179 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 EPB41L5Q9HCM4 733 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 DMAP1Q9NPF5 467 aaPredicted RBP13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 TRIM16O95361 564 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 CHGBP05060 677 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 CYTH1Q15438 398 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 TRAPPC3LQ5T215 181 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 ADNPQ9H2P0 1102 aa13.48□□□□□ -0.25
CACNA1C-209ENST00000399603 PTPRTO14522 1441 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 hCG_1642624A0A1W2PR95 340 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 LDHBP07195 334 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 NSMFQ6X4W1 530 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 HEATR4Q86WZ0 1026 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 MMTAG2Q9BU76 263 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 TMEM245Q9H330 911 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 KLHL31Q9H511 634 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 EIF4A1P60842 406 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 ANO4Q32M45 955 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 MCTP2Q6DN12 878 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 UNC45BQ8IWX7 931 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 FTOQ9C0B1 505 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 DNAJC17Q9NVM6 304 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 PPARGC1AQ9UBK2 798 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 H0Y626 953 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 POLR2BP30876 1174 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 TUBB6Q9BUF5 446 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 BEGAINQ9BUH8 593 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 APOL6Q9BWW8 343 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 ATP6V0A4Q9HBG4 840 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 CFBP00751 764 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 PLS3P13797 630 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 ACTN3Q08043 901 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 TSR3Q9UJK0 312 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 PRDM1O75626 825 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 RSRC2Q7L4I2 434 aaKnown RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 SYT2Q8N9I0 419 aaPredicted RBP13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 C1orf112Q9NSG2 853 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 RAD50Q92878 1312 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 HSPA4LO95757 839 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 RASSF7Q02833 373 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 BBS5Q8N3I7 341 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 THAP11Q96EK4 314 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 ARMT1Q9H993 441 aa13.47□□□□□ -0.25
CACNA1C-209ENST00000399603 NR1I2O75469 434 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 RRM2BQ7LG56 351 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 CCDC127Q96BQ5 260 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 ADA2Q9NZK5 511 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 SESN1Q9Y6P5 492 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 SH3TC1Q8TE82 1336 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 TYW5A2RUC4 315 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 TMEM232C9JQI7 657 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 LBRQ14739 615 aaKnown RBP13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 MAPK13O15264 365 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 LIG4P49917 911 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 ERFP50548 548 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 EPHB1P54762 984 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 SLC44A4Q53GD3 710 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 OMA1Q96E52 524 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 XAGE2Q96GT9 111 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 CCDC87Q9NVE4 849 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 USE1Q9NZ43 259 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 OR8K1Q8NGG5 319 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 GINS4Q9BRT9 223 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 SLAIN2Q9P270 581 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 SOX13Q9UN79 622 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 PPP2R2CQ9Y2T4 447 aa13.46□□□□□ -0.25
CACNA1C-209ENST00000399603 KCNJ18B7U540 433 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 DEAF1O75398 565 aaPredicted RBP13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 KCNJ12Q14500 433 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 KRT77Q7Z794 578 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 TRIM69Q86WT6 500 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 PLD3Q8IV08 490 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 SNRNP27Q8WVK2 155 aaKnown RBP13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 ELAC2Q9BQ52 826 aaKnown RBP13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 CPSF3Q9UKF6 684 aaKnown RBP13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 NOVA2Q9UNW9 492 aaKnown RBP13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 TMEM191CA6NGB0 347 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 ENO4A6NNW6 628 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 TMEM191BP0C7N4 346 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 AARSP49588 968 aaKnown RBP eCLIP13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 ZNF513Q8N8E2 541 aaPredicted RBP13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 CNBD1Q8NA66 436 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 JDP2Q8WYK2 163 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 SNX25Q9H3E2 840 aa13.46□□□□□ -0.26
CACNA1C-209ENST00000399603 UFL1O94874 794 aa13.45□□□□□ -0.26
CACNA1C-209ENST00000399603 PLCG2P16885 1265 aa13.45□□□□□ -0.26
CACNA1C-209ENST00000399603 FRA10AC1Q70Z53 315 aa13.45□□□□□ -0.26
CACNA1C-209ENST00000399603 CNPY4Q8N129 248 aa13.45□□□□□ -0.26
CACNA1C-209ENST00000399603 CEP170Q5SW79 1584 aa13.45□□□□□ -0.26
CACNA1C-209ENST00000399603 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms