RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FAM84BQ96KN1 310 aaPredicted RBP15.38■□□□□ 0.05
APOB-202ENST00000399256 ARPP21Q9UBL0 812 aaPredicted RBP15.38■□□□□ 0.05
APOB-202ENST00000399256 DDX20Q9UHI6 824 aaKnown RBP15.38■□□□□ 0.05
APOB-202ENST00000399256 NIP7Q9Y221 180 aaKnown RBP eCLIP15.38■□□□□ 0.053e-27■□□□□ 11.1
APOB-202ENST00000399256 GOLGA6L7A0A1B0GV03 622 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 KCNK3O14649 394 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 KLRK1P26718 216 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 PRDX5P30044 214 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 RAPGEF1Q13905 1077 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 UAP1Q16222 522 aaPredicted RBP15.37■□□□□ 0.05
APOB-202ENST00000399256 PLCB1Q9NQ66 1216 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 RREB1Q92766 1687 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 A0A087X0T9 212 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 GMNCA6NCL1 334 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 NOL4O94818 638 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 FAM228BP0C875 321 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 CTNNA1P35221 906 aaKnown RBP15.37■□□□□ 0.05
APOB-202ENST00000399256 CDR1P51861 262 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 TEX2Q8IWB9 1127 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 GUF1Q8N442 669 aaKnown RBP15.37■□□□□ 0.05
APOB-202ENST00000399256 PDHBP11177 359 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 ECHS1P30084 290 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 ODF2Q5BJF6 829 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 GALNT17Q6IS24 598 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 NEK8Q86SG6 692 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 DNAAF5Q86Y56 855 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 SEPT12Q8IYM1 358 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 ARFGAP2Q8N6H7 521 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 TAF4BQ92750 862 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 CDK5RAP3Q96JB5 506 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 NEUROG2Q9H2A3 272 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 ATP8A2Q9NTI2 1148 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 CEP72Q9P209 647 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 ADAMTS1Q9UHI8 967 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 STX8Q9UNK0 236 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 PCDHGC5Q9Y5F6 944 aa15.37■□□□□ 0.05
APOB-202ENST00000399256 NTSR2O95665 410 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 GNAQP50148 359 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 LRRC63Q05C16 580 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 ZNF844Q08AG5 666 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 PLCB4Q15147 1175 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 LARP4BQ92615 738 aaKnown RBP15.36■□□□□ 0.05
APOB-202ENST00000399256 PNMA5Q96PV4 448 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 AP1M1Q9BXS5 423 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 OSBPL7Q9BZF2 842 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 ISCUQ9H1K1 167 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 LUC7LQ9NQ29 371 aaKnown RBP15.36■□□□□ 0.05
APOB-202ENST00000399256 HAUS2Q9NVX0 235 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 ATP6V0A2Q9Y487 856 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 SMCO2A6NFE2 343 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 DNM1LO00429 736 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 FAM182BQ5T319 152 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 KRT25Q7Z3Z0 450 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 DGKHQ86XP1 1220 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 CEP57Q86XR8 500 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 FAM133AQ8N9E0 248 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 C1orf131Q8NDD1 294 aaKnown RBP15.36■□□□□ 0.05
APOB-202ENST00000399256 TBCKQ8TEA7 893 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 UBLCP1Q8WVY7 318 aaPredicted RBP15.36■□□□□ 0.05
APOB-202ENST00000399256 TSG101Q99816 390 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 SUFUQ9UMX1 484 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 SBF2Q86WG5 1849 aa15.36■□□□□ 0.05
APOB-202ENST00000399256 ABCB11O95342 1321 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 CLSTN1O94985 981 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 MYBP10242 640 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 C3orf67Q6ZVT6 689 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 TMEM260Q9NX78 707 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 BIN2Q9UBW5 565 aaPredicted RBP15.35■□□□□ 0.05
APOB-202ENST00000399256 CNOT8Q9UFF9 292 aaKnown RBP15.35■□□□□ 0.05
APOB-202ENST00000399256 SLC12A6Q9UHW9 1150 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 MCM8Q9UJA3 840 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 GGA2Q9UJY4 613 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 BTAF1O14981 1849 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 H0YGN5 161 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 TRAF5O00463 557 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 CEP104O60308 925 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 FLT3P36888 993 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 UBE4AQ14139 1066 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 NEDD9Q14511 834 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 SLC18A3Q16572 532 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 PREPLQ4J6C6 727 aaPredicted RBP15.35■□□□□ 0.05
APOB-202ENST00000399256 LRIG3Q6UXM1 1119 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 EDEM3Q9BZQ6 932 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 MKNK2Q9HBH9 465 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 VAT1LQ9HCJ6 419 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 TFCP2L1Q9NZI6 479 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 NFS1Q9Y697 457 aa15.35■□□□□ 0.05
APOB-202ENST00000399256 LOC102724428A0A0B4J2F2 783 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 PVALEFA0A1B0GWK0 134 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 POTEMA6NI47 508 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 TRAPPC3O43617 180 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 SIK1P57059 783 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 KLHL30Q0D2K2 578 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 RPS6KA1Q15418 735 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 SBK1Q52WX2 424 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 PTF1AQ7RTS3 328 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 DDX12PQ92771 950 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 SCLT1Q96NL6 688 aa15.34■□□□□ 0.05
APOB-202ENST00000399256 ZMYND12Q9H0C1 365 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms