RNA–Protein interactions for RNA: ENST00000398610.2

PCDHGA10-201, Transcript of protocadherin gamma subfamily A, 10, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA10, Length 4,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA10-201ENST00000398610 ERCC6LQ2NKX8 1250 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 CCDC125Q86Z20 511 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 IFT20Q8IY31 132 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 PPANQ9NQ55 473 aaKnown RBP11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 ALDH3A1P30838 453 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 RUFY4Q6ZNE9 571 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 SH2D3AQ9BRG2 576 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 MXD3Q9BW11 206 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 NKIRAS1Q9NYS0 192 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 SIPA1L3O60292 1781 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 ETF1P62495 437 aaKnown RBP11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 KIF22Q14807 665 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 CDC37Q16543 378 aaPredicted RBP11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 C7orf31Q8N865 590 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 PIGOQ8TEQ8 1089 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 FAM149B1Q96BN6 582 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 SENP2Q9HC62 589 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 SLC5A4Q9NY91 659 aa11.55□□□□□ -0.56
PCDHGA10-201ENST00000398610 USP17L5A8MUK1 530 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 KIF28PB7ZC32 967 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 NOL3O60936 208 aaKnown RBP11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 SRGAP2CP0DJJ0 459 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 IFNAR1P17181 557 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 NR2F2P24468 414 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 ICE2Q659A1 982 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 INTS8Q75QN2 995 aaKnown RBP11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 VPS52Q8N1B4 723 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 CABS1Q96KC9 395 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 AGXT2Q9BYV1 514 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 NXF1Q9UBU9 619 aaKnown RBP11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 SWAP70Q9UH65 585 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 RPS6KA1Q15418 735 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 ASPRV1Q53RT3 343 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 MARCH10Q8NA82 808 aaPredicted RBP11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 LARP4BQ92615 738 aaKnown RBP11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 NUP58Q9BVL2 599 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 HPS5Q9UPZ3 1129 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 CAPN9O14815 690 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 CTTNQ14247 550 aaKnown RBP11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 BHMT2Q9H2M3 363 aa11.54□□□□□ -0.56
PCDHGA10-201ENST00000398610 ECE2O60344 883 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 ATF7P17544 494 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 CDC27P30260 824 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 RFC1P35251 1148 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 TFAMQ00059 246 aaKnown RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 DMP1Q13316 513 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 FAM83BQ5T0W9 1011 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 PDXDC2PQ6P474 469 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 TMED8Q6PL24 325 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 RPGRIP1Q96KN7 1286 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 NLRP4Q96MN2 994 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 RIOK1Q9BRS2 568 aaKnown RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 MED10Q9BTT4 135 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 DISC1Q9NRI5 854 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 POLR3EQ9NVU0 708 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 GOLGA8IPA6NC78 632 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 GOLGA8JA6NMD2 632 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 WDR46O15213 610 aaKnown RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 FOSP01100 380 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 MRFAP1L1Q96HT8 127 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 RAVER2Q9HCJ3 691 aaKnown RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 PPME1Q9Y570 386 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 ATP5DP30049 168 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 DBN1Q16643 649 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 KCPQ6ZWJ8 1503 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 CEP95Q96GE4 821 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 TMEM47Q9BQJ4 181 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 DHX36Q9H2U1 1008 aaKnown RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 DCP1AQ9NPI6 582 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 PARP2Q9UGN5 583 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 PCDHA4Q9UN74 947 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 KDM3AQ9Y4C1 1321 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 ESYT2A0FGR8 921 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 GTPBP6O43824 516 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 PAK2Q13177 524 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 TSTA3Q13630 321 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 SND1Q7KZF4 910 aaKnown RBP eCLIP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 ZBTB33Q86T24 672 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 SLFN12Q8IYM2 578 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 RNF168Q8IYW5 571 aaPredicted RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 ZNF34Q8IZ26 560 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 NSMCE1Q8WV22 266 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 OTUD5Q96G74 571 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 CALR3Q96L12 384 aaKnown RBP11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 C1orf112Q9NSG2 853 aa11.53□□□□□ -0.56
PCDHGA10-201ENST00000398610 ABCC12Q96J65 1359 aa11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 A0A1W2PQ27 194 aa11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 A0A1W2PQ64 194 aa11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 A0A1W2PQD8 194 aa11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 HMGB1P1B2RPK0 211 aaPredicted RBP11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 KCNK3O14649 394 aa11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 ASNSP08243 561 aa11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 ARPP19P56211 112 aa11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 NAA30Q147X3 362 aaPredicted RBP11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 NBPF20Q3BBV1 942 aa11.52□□□□□ -0.56
PCDHGA10-201ENST00000398610 FAM84BQ96KN1 310 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 402.2 ms