RNA–Protein interactions for RNA: ENST00000398372.2

SMARCE1P6-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 6, humanhuman

BASIC

Gene SMARCE1P6, Length 1,216 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P6-201ENST00000398372 PPP1R12CQ9BZL4 782 aa7.35□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TCP11L1Q9NUJ3 509 aa7.35□□□□□ -1.23
SMARCE1P6-201ENST00000398372 DIS3Q9Y2L1 958 aaKnown RBP7.35□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ZKSCAN5Q9Y2L8 839 aa7.35□□□□□ -1.23
SMARCE1P6-201ENST00000398372 NEDD4P46934 1319 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 UMODL1Q5DID0 1318 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 MYADML2A6NDP7 307 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TTC36A6NLP5 189 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 DHX16O60231 1041 aaKnown RBP7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 PLA2G6O60733 806 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 OATP04181 439 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TOP1P11387 765 aaKnown RBP7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 PCP11498 1178 aaKnown RBP7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CPA1P15085 419 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ACLYP53396 1101 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 OAZ1P54368 228 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 IMMTQ16891 758 aaKnown RBP7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CCDC96Q2M329 555 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CCSAPQ6IQ19 270 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TTBK2Q6IQ55 1244 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CCDC174Q6PII3 467 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ZNF771Q7L3S4 317 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 OTOP2Q7RTS6 562 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CHST13Q8NET6 341 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 DCAF4Q8WV16 495 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 AGBL1Q96MI9 1066 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 MTA3Q9BTC8 594 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 RNF41Q9H4P4 317 aaPredicted RBP7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 HOMER2Q9NSB8 354 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CCDC39Q9UFE4 941 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CFAP45Q9UL16 551 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 PRR12Q9ULL5 1215 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 COG5Q9UP83 839 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 BOLA1Q9Y3E2 137 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 CEP83Q9Y592 693 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 TRIOO75962 3097 aa7.34□□□□□ -1.23
SMARCE1P6-201ENST00000398372 ZNF536O15090 1300 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 FRMPD2Q68DX3 1309 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 MYH6P13533 1939 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 TCHHQ07283 1943 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 DNAJC25-GNG10A0A024R161 153 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 SYCE3A1L190 88 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 VPS37CA5D8V6 355 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 TTLL13PA6NNM8 815 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 E7EWF7 191 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 ADAMTS4O75173 837 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 CAVIN2O95810 425 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 SNAI1O95863 264 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 FGBP02675 491 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 ZNF865P0CJ78 1059 aaPredicted RBP7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 ALAS1P13196 640 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 SLC16A2P36021 539 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 SSR1P43307 286 aaKnown RBP7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 KCNA10Q16322 511 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 TKFCQ3LXA3 575 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 Q6ZUG5 572 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 FAM178BQ8IXR5 827 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 GJD3Q8N144 294 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 ANKRD35Q8N283 1001 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 TMEM199Q8N511 208 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 MSL3Q8N5Y2 521 aaKnown RBP7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 ESR2Q92731 530 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 DDX12PQ92771 950 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 FGD4Q96M96 766 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 ZKSCAN3Q9BRR0 538 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 RBSNQ9H1K0 784 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 ACAD9Q9H845 621 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 IL23AQ9NPF7 189 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 RNF146Q9NTX7 359 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 DDX19AQ9NUU7 478 aaKnown RBP7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 FBXO40Q9UH90 709 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 NRBP1Q9UHY1 535 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 CNPY2Q9Y2B0 182 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 MYH15Q9Y2K3 1946 aa7.33□□□□□ -1.24
SMARCE1P6-201ENST00000398372 B4E1Z4 1266 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 RBAK-RBAKDNI3L0D1 243 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 LPXNO60711 386 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 KDM4AO75164 1064 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 CA3P07451 260 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 CCDC172P0C7W6 258 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 RARBP10826 455 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 PDHBP11177 359 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 AKR1A1P14550 325 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 SSTR3P32745 418 aaPredicted RBP7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 CNTN2Q02246 1040 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 DNM1Q05193 864 aaKnown RBP7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 ZNF543Q08ER8 600 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 MUM1L1Q5H9M0 696 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 IER5LQ5T953 404 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 SYDE2Q5VT97 1194 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 PSRC1Q6PGN9 363 aaPredicted RBP7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 MAMDC4Q6UXC1 1216 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 BTNL9Q6UXG8 535 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 STOX1Q6ZVD7 989 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 HFE2Q6ZVN8 426 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 RNF180Q86T96 592 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 KLHDC9Q8NEP7 349 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 PRSS33Q8NF86 280 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 NCOA7Q8NI08 942 aa7.32□□□□□ -1.24
SMARCE1P6-201ENST00000398372 OXER1Q8TDS5 423 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms