RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 CXCL17Q6UXB2 119 aa28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 NOSTRINQ8IVI9 506 aa28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 PHF24Q9UPV7 400 aa28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 WNT7AO00755 349 aa28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 MMP3P08254 477 aa28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 COL6A1P12109 1028 aa28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 ATP2B1P20020 1258 aa28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 METTL7BQ6UX53 244 aa28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 ZNF577Q9BSK1 485 aa28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 TSEN34Q9BSV6 310 aaKnown RBP28.8■■■□□ 2.2
TMEM55B-202ENST00000398020 A0A1W2PQ45 241 aaPredicted RBP28.79■■■□□ 2.2
TMEM55B-202ENST00000398020 A0A1W2PQY0 241 aa28.79■■■□□ 2.2
TMEM55B-202ENST00000398020 VPS37CA5D8V6 355 aaPredicted RBP28.79■■■□□ 2.2
TMEM55B-202ENST00000398020 SLC37A4O43826 429 aa28.79■■■□□ 2.2
TMEM55B-202ENST00000398020 MYL3P08590 195 aa28.79■■■□□ 2.2
TMEM55B-202ENST00000398020 BRDTQ58F21 947 aaPredicted RBP28.79■■■□□ 2.2
TMEM55B-202ENST00000398020 PPTC7Q8NI37 304 aa28.79■■■□□ 2.2
TMEM55B-202ENST00000398020 GJA10Q969M2 543 aa28.79■■■□□ 2.2
TMEM55B-202ENST00000398020 DDX25Q9UHL0 483 aaKnown RBP28.79■■■□□ 2.2
TMEM55B-202ENST00000398020 CYP3A7-CYP3A51PA0A087WV96 503 aa28.78■■■□□ 2.2
TMEM55B-202ENST00000398020 MOXD2PA6NHM9 499 aa28.78■■■□□ 2.2
TMEM55B-202ENST00000398020 DDX39AO00148 427 aaKnown RBP28.78■■■□□ 2.2
TMEM55B-202ENST00000398020 IPO5O00410 1097 aaKnown RBP28.78■■■□□ 2.2
TMEM55B-202ENST00000398020 CYP3A7P24462 503 aa28.78■■■□□ 2.2
TMEM55B-202ENST00000398020 U2AF2P26368 475 aaKnown RBP eCLIP28.78■■■□□ 2.22e-7■■■■□ 24.6
TMEM55B-202ENST00000398020 GIMAP8Q8ND71 665 aaPredicted RBP28.78■■■□□ 2.2
TMEM55B-202ENST00000398020 NOP56O00567 594 aaKnown RBP28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 MSH4O15457 936 aa28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 ZEB2O60315 1214 aa28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 PDCP20941 246 aa28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 SYT1P21579 422 aa28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 ATN1P54259 1190 aaPredicted RBP28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 Q4G0T1 1027 aa28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 MOXD1Q6UVY6 613 aa28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 SDF4Q9BRK5 362 aa28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 PPP4R3AQ6IN85 833 aa28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 MBOAT7Q96N66 472 aa28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 JPH1Q9HDC5 661 aaPredicted RBP28.77■■■□□ 2.2
TMEM55B-202ENST00000398020 PURAQ00577 322 aaKnown RBP28.76■■■□□ 2.19
TMEM55B-202ENST00000398020 VTI1AQ96AJ9 217 aa28.76■■■□□ 2.19
TMEM55B-202ENST00000398020 DGKDQ16760 1214 aa28.75■■■□□ 2.19
TMEM55B-202ENST00000398020 GLT1D1Q96MS3 346 aa28.75■■■□□ 2.19
TMEM55B-202ENST00000398020 GPR20Q99678 358 aa28.75■■■□□ 2.19
TMEM55B-202ENST00000398020 TNRC18O15417 2968 aaPredicted RBP28.75■■■□□ 2.19
TMEM55B-202ENST00000398020 DHX15O43143 795 aaKnown RBP28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 ZNF286BP0CG31 522 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 GCFC2P16383 781 aaKnown RBP28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 POTEDQ86YR6 584 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 STARD7Q9NQZ5 370 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 POLR3EQ9NVU0 708 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 SLC9A2Q9UBY0 812 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 NFASCO94856 1347 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 CHMP4BP1P59074 171 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 PSMC6P62333 389 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 BECN1Q14457 450 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 FERMT3Q86UX7 667 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 PPP1R13LQ8WUF5 828 aa28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 NAP1L4Q99733 375 aaKnown RBP28.74■■■□□ 2.19
TMEM55B-202ENST00000398020 RGS19P49795 217 aa28.73■■■□□ 2.19
TMEM55B-202ENST00000398020 NBR1Q14596 966 aa28.73■■■□□ 2.19
TMEM55B-202ENST00000398020 ETNPPLQ8TBG4 499 aa28.73■■■□□ 2.19
TMEM55B-202ENST00000398020 SLC5A5Q92911 643 aa28.72■■■□□ 2.19
TMEM55B-202ENST00000398020 TBC1D22BQ9NU19 505 aa28.72■■■□□ 2.19
TMEM55B-202ENST00000398020 PPFIA4O75335 1185 aa28.71■■■□□ 2.19
TMEM55B-202ENST00000398020 CCNE2O96020 404 aa28.71■■■□□ 2.19
TMEM55B-202ENST00000398020 MCM7P33993 719 aa28.71■■■□□ 2.19
TMEM55B-202ENST00000398020 LRRC26Q2I0M4 334 aa28.71■■■□□ 2.19
TMEM55B-202ENST00000398020 SLC39A5Q6ZMH5 540 aa28.71■■■□□ 2.19
TMEM55B-202ENST00000398020 MTG1Q9BT17 334 aaPredicted RBP28.71■■■□□ 2.19
TMEM55B-202ENST00000398020 NOL7Q9UMY1 257 aaKnown RBP28.71■■■□□ 2.19
TMEM55B-202ENST00000398020 GSTTP1A0A1W2PQM5 241 aa28.7■■■□□ 2.19
TMEM55B-202ENST00000398020 STX6O43752 255 aa28.7■■■□□ 2.19
TMEM55B-202ENST00000398020 HOXD8P13378 290 aaPredicted RBP28.7■■■□□ 2.19
TMEM55B-202ENST00000398020 TCF7P36402 384 aaPredicted RBP28.7■■■□□ 2.19
TMEM55B-202ENST00000398020 ACTR2P61160 394 aa28.7■■■□□ 2.19
TMEM55B-202ENST00000398020 ZNF174Q15697 407 aa28.7■■■□□ 2.19
TMEM55B-202ENST00000398020 UTP14CQ5TAP6 766 aaKnown RBP28.7■■■□□ 2.19
TMEM55B-202ENST00000398020 LRCH2Q5VUJ6 765 aa28.7■■■□□ 2.19
TMEM55B-202ENST00000398020 TRIM50Q86XT4 487 aa28.7■■■□□ 2.19
TMEM55B-202ENST00000398020 KPNA6O60684 536 aa28.7■■■□□ 2.18
TMEM55B-202ENST00000398020 GAS7O60861 476 aa28.7■■■□□ 2.18
TMEM55B-202ENST00000398020 CABYRO75952 493 aa28.7■■■□□ 2.18
TMEM55B-202ENST00000398020 TOB1P50616 345 aaPredicted RBP28.7■■■□□ 2.18
TMEM55B-202ENST00000398020 TTC38Q5R3I4 469 aa28.7■■■□□ 2.18
TMEM55B-202ENST00000398020 SEPT1Q8WYJ6 367 aa28.7■■■□□ 2.18
TMEM55B-202ENST00000398020 KAT2BQ92831 832 aa28.7■■■□□ 2.18
TMEM55B-202ENST00000398020 KCNMB3Q9NPA1 279 aa28.7■■■□□ 2.18
TMEM55B-202ENST00000398020 MTMR6Q9Y217 621 aa28.7■■■□□ 2.18
TMEM55B-202ENST00000398020 ELP1O95163 1332 aa28.69■■■□□ 2.18
TMEM55B-202ENST00000398020 NEMFO60524 1076 aa28.69■■■□□ 2.18
TMEM55B-202ENST00000398020 LGALS2P05162 132 aa28.69■■■□□ 2.18
TMEM55B-202ENST00000398020 HAS1Q92839 578 aa28.69■■■□□ 2.18
TMEM55B-202ENST00000398020 C16orf70Q9BSU1 422 aa28.69■■■□□ 2.18
TMEM55B-202ENST00000398020 GRIN2DO15399 1336 aa28.68■■■□□ 2.18
TMEM55B-202ENST00000398020 CHMP2AO43633 222 aa28.68■■■□□ 2.18
TMEM55B-202ENST00000398020 MARCH6O60337 910 aa28.68■■■□□ 2.18
TMEM55B-202ENST00000398020 RIT2Q99578 217 aa28.68■■■□□ 2.18
TMEM55B-202ENST00000398020 TEKT3Q9BXF9 490 aa28.68■■■□□ 2.18
TMEM55B-202ENST00000398020 ALPK3Q96L96 1907 aa28.68■■■□□ 2.18
TMEM55B-202ENST00000398020 PSMD10O75832 226 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms