RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 GMNCA6NCL1 334 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GUF1Q8N442 669 aaKnown RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CCDC63Q8NA47 563 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 FAM84BQ96KN1 310 aaPredicted RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PLVAPQ9BX97 442 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TAF1DQ9H5J8 278 aaPredicted RBP12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MINPP1Q9UNW1 487 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 FRMD4BQ9Y2L6 1034 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ATP6V0A2Q9Y487 856 aa12.16□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MEIS1O00470 390 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 NEBLO76041 1014 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GFPT2O94808 682 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TDP2O95551 362 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SLC16A2P36021 539 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 BTDP43251 543 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 AARSP49588 968 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 WDR59Q6PJI9 974 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MYCT1Q8N699 235 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ERGIC2Q96RQ1 377 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ASIC3Q9UHC3 531 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 DAAM1Q9Y4D1 1078 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 GNPATO15228 680 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 ORC4O43929 436 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 KLRC1P26715 233 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CYP2J2P51589 502 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PRR16Q569H4 304 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 FAM133BQ5BKY9 247 aaKnown RBP12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 AMACRQ9UHK6 382 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 HDAC9Q9UKV0 1011 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MYMKA6NI61 221 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 TMOD1P28289 359 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 CETN2P41208 172 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 LACTBP83111 547 aaPredicted RBP12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 USH1GQ495M9 461 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 UBL4BQ8N7F7 174 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 BANK1Q8NDB2 785 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 SH3RF3Q8TEJ3 882 aaPredicted RBP12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 MRRFQ96E11 262 aaKnown RBP12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 PBKQ96KB5 322 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 FMO2Q99518 471 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 KLC4Q9NSK0 619 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 FBXL5Q9UKA1 691 aa12.15□□□□□ -0.46
CSGALNACT1-202ENST00000397998 KDM3AQ9Y4C1 1321 aa12.15□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PVALEFA0A1B0GWK0 134 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 DAPK3O43293 454 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 RAD51CO43502 376 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FGGP02679 453 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FGFR2P21802 821 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 VPS41P49754 854 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 HDLBPQ00341 1268 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MICAL1Q8TDZ2 1067 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PLCB1Q9NQ66 1216 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NWD1Q149M9 1564 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CCDC169A6NNP5 214 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 E9PMD0 336 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CUL1Q13616 776 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 DPP8Q6V1X1 898 aaPredicted RBP12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TSEN2Q8NCE0 465 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NSUN4Q96CB9 384 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CCDC77Q9BR77 488 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ACTR5Q9H9F9 607 aaPredicted RBP12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 EXOC3O60645 756 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 AFPP02771 609 aaKnown RBP12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GLI1P08151 1106 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GRM4Q14833 912 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TAOK1Q7L7X3 1001 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 FAM114A2Q9NRY5 505 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 BSDC1Q9NW68 430 aaPredicted RBP12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 NKIRAS1Q9NYS0 192 aa12.14□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PIK3C2AO00443 1686 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SART1O43290 800 aaKnown RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PLA2G4BP0C869 781 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 SLC8A1P32418 973 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ADCY1Q08828 1119 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 COASYQ13057 564 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MFSD14BQ5SR56 506 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TBC1D1Q86TI0 1168 aaPredicted RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 CREG2Q8IUH2 290 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 C7orf25Q9BPX7 421 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 KBTBD4Q9NVX7 518 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PTPN22Q9Y2R2 807 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 BZW2Q9Y6E2 419 aaKnown RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PRPF6O94906 941 aaKnown RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PSMD2Q13200 908 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZKSCAN8Q15776 578 aaPredicted RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 TMED8Q6PL24 325 aaPredicted RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GSTA5Q7RTV2 222 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 GPR101Q96P66 508 aaPredicted RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 DUSP9Q99956 384 aaKnown RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 LRRN2O75325 713 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 PPP2R2AP63151 447 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 INTS8Q75QN2 995 aaKnown RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 ZNF34Q8IZ26 560 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 RAD54LQ92698 747 aa12.13□□□□□ -0.47
CSGALNACT1-202ENST00000397998 IFT74Q96LB3 600 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms