RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SLC8A1P32418 973 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 MAGEA1P43355 309 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 SLC8A3P57103 927 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 SV2BQ7L1I2 683 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 CCDC155Q8N6L0 562 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 TSEN2Q8NCE0 465 aaKnown RBP17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 TBCKQ8TEA7 893 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 TGFBRAP1Q8WUH2 860 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 CCDC114Q96M63 670 aa17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 BIN2Q9UBW5 565 aaPredicted RBP17.59■□□□□ 0.41
CHMP1A-201ENST00000397901 MAST2Q6P0Q8 1798 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 ECM2O94769 699 aaPredicted RBP17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 PPP1R2P41236 205 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 DNA2P51530 1060 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 EPHB4P54760 987 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 GFPT1Q06210 699 aaPredicted RBP17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 EMC10Q5UCC4 262 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 HAUS3Q68CZ6 603 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 CYB5D1Q6P9G0 228 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 SAMD1Q6SPF0 538 aaPredicted RBP17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 SLC51AQ86UW1 340 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 ARMC2Q8NEN0 867 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 TMEM260Q9NX78 707 aa17.58■□□□□ 0.41
CHMP1A-201ENST00000397901 SRRM3A6NNA2 597 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 PDHBP11177 359 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 RFC4P35249 363 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 RASSF7Q02833 373 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 IFT88Q13099 833 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 MAN2A1Q16706 1144 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 TRAPPC3LQ5T215 181 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 EMBQ6PCB8 327 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 TMED8Q6PL24 325 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 TMC4Q7Z404 712 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 MAPKAPK5Q8IW41 473 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 C6orf50Q9HD87 102 aa17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.58■□□□□ 0.4
CHMP1A-201ENST00000397901 ONECUT3O60422 494 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 TCP1P17987 556 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 IBSPP21815 317 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 ATP1A2P50993 1020 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 GRB10Q13322 594 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 LRRC41Q15345 812 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 PTGISQ16647 500 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 ZNF572Q7Z3I7 529 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 MS4A14Q96JA4 679 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 TANGO6Q9C0B7 1094 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 RBM12Q9NTZ6 932 aaKnown RBP17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 BLOC1S4Q9NUP1 217 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 STIM2Q9P246 746 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 CCDC88AQ3V6T2 1871 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 SLC1A4P43007 532 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 CCNHP51946 323 aaPredicted RBP17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 INHBEP58166 350 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 IFFO1Q0D2I5 559 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 NNTQ13423 1086 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 GRIK5Q16478 980 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 SOGA3Q5TF21 947 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 C6orf89Q6UWU4 347 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 FAM196AQ6ZSG2 479 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 CCDC121Q6ZUS5 278 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 NLRP14Q86W24 1093 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 FAM228AQ86W67 206 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 FUKQ8N0W3 1084 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 GLIS3Q8NEA6 775 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 MTMR8Q96EF0 704 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 CCT8L2Q96SF2 557 aa17.57■□□□□ 0.4
CHMP1A-201ENST00000397901 PPP1R37O75864 691 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 LDHBP07195 334 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 PRLRP16471 622 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 RASA1P20936 1047 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 PAFAH1B1P43034 410 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 NFIXQ14938 502 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 TDRD12Q587J7 1177 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 C8orf74Q6P047 294 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 CACNA2D4Q7Z3S7 1137 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 MYCBPAPQ8TBZ2 947 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 ZNF483Q8TF39 744 aaPredicted RBP17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 CDK5RAP3Q96JB5 506 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 RNPC3Q96LT9 517 aaKnown RBP17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 ANKRD33BA6NCL7 494 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 LCA5LO95447 670 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 GNA11P29992 359 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 APBA1Q02410 837 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 ICA1Q05084 483 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 ITIH3Q06033 890 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 NAA25Q14CX7 972 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 UNC13DQ70J99 1090 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 BAP1Q92560 729 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 CAVIN3Q969G5 261 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 IQCDQ96DY2 449 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 PNMA5Q96PV4 448 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 PIGSQ96S52 555 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 TLR10Q9BXR5 811 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 NLRC4Q9NPP4 1024 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 LRRC4BQ9NT99 713 aa17.56■□□□□ 0.4
CHMP1A-201ENST00000397901 FAM107AO95990 144 aa17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 GBP2P32456 591 aaPredicted RBP17.55■□□□□ 0.4
CHMP1A-201ENST00000397901 CCDC84Q86UT8 332 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms