RNA–Protein interactions for RNA: ENST00000397772.2

TPM3P2-201, Transcript of tropomyosin 3 pseudogene 2, humanhuman

BASIC

Gene TPM3P2, Length 723 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P2-201ENST00000397772 GNL2Q13823 731 aaKnown RBP11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 SKOR2Q2VWA4 1001 aaPredicted RBP11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 PPP2R2DQ66LE6 453 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 KRT40Q6A162 431 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 FERMT3Q86UX7 667 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 ANKRD35Q8N283 1001 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 CCDC82Q8N4S0 544 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 SRBD1Q8N5C6 995 aaKnown RBP11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 FAM133AQ8N9E0 248 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 KHSRPQ92945 711 aaKnown RBP eCLIP11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 SCLYQ96I15 445 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 AGBL1Q96MI9 1066 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 ZNF396Q96N95 335 aaPredicted RBP11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 LRFN3Q9BTN0 628 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 C1QTNF1Q9BXJ1 281 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 BRMS1Q9HCU9 246 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 RTN4Q9NQC3 1192 aaKnown RBP11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 PCDHA11Q9Y5I1 949 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 MTCH2Q9Y6C9 303 aa11.1□□□□□ -0.63
TPM3P2-201ENST00000397772 hCG_1984214I3L0E3 225 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 ZBED4O75132 1171 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 PPFIA3O75145 1194 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 ARHGEF15O94989 841 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 SCG2P13521 617 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 SMPD1P17405 629 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 NCLP19338 710 aaKnown RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 POU3F3P20264 500 aaPredicted RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 PSMC6P62333 389 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 GUCY1B3Q02153 619 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 TTLL4Q14679 1199 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 PFKFB3Q16875 520 aaPredicted RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 CMTR1Q8N1G2 835 aaKnown RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 ZNF713Q8N859 430 aaPredicted RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 GMCL1P1Q8NEA9 526 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 CHST13Q8NET6 341 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 CCDC148Q8NFR7 591 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 KRTAP3-3Q9BYR6 98 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 KRTAP3-2Q9BYR7 98 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 SCAND2PQ9GZW5 306 aaPredicted RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 MTIF3Q9H2K0 278 aaKnown RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 SH3GLB2Q9NR46 395 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 PDGFCQ9NRA1 345 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 SEC63Q9UGP8 760 aaKnown RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 MTMR7Q9Y216 660 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 SLC4A7Q9Y6M7 1214 aa11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 V9GY48 417 aaPredicted RBP11.09□□□□□ -0.63
TPM3P2-201ENST00000397772 MUC6Q6W4X9 2439 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 DYNC1LI2O43237 492 aaPredicted RBP11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 TLL1O43897 1013 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 CABYRO75952 493 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 MMP1P03956 469 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 HOXB3P14651 431 aaPredicted RBP11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 ZNF543Q08ER8 600 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 PKN1Q16512 942 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 FSCN1Q16658 493 aaKnown RBP11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 CCDC96Q2M329 555 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 TAPT1Q6NXT6 567 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 TLK2Q86UE8 772 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 STAG2Q8N3U4 1231 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 TMEM87AQ8NBN3 555 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 CCDC12Q8WUD4 166 aaPredicted RBP11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 GMCL1Q96IK5 515 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 AIFM3Q96NN9 605 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 HS3ST6Q96QI5 342 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 CERS4Q9HA82 394 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 C11orf16Q9NQ32 467 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 A1CFQ9NQ94 594 aaKnown RBP11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 HOMER2Q9NSB8 354 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 FBXO40Q9UH90 709 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 BRWD1Q9NSI6 2320 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 ZNF536O15090 1300 aa11.08□□□□□ -0.64
TPM3P2-201ENST00000397772 CA3P07451 260 aa11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 ATP2A2P16615 1042 aaKnown RBP11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 CALML3P27482 149 aa11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 SLC1A4P43007 532 aa11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 OAZ1P54368 228 aa11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 DNM1Q05193 864 aaKnown RBP11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 SPRED2Q7Z698 418 aa11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 ANP32EQ9BTT0 268 aa11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 FOXP1Q9H334 677 aaPredicted RBP11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 RIOX1Q9H6W3 641 aa11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 FEM1BQ9UK73 627 aa11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
TPM3P2-201ENST00000397772 LRRC37A2A6NM11 1700 aa11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 ZBBXA8MT70 800 aa11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 FIBPO43427 364 aa11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 PRPF40AO75400 957 aaKnown RBP11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 MBD3O95983 291 aa11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 GOLGA8HP0CJ92 632 aa11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 CYP2C9P11712 490 aa11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 U2AF2P26368 475 aaKnown RBP eCLIP11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 KRT2P35908 639 aa11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 SKIV2LQ15477 1246 aaKnown RBP11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 AAK1Q2M2I8 961 aa11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 FOXD4L6Q3SYB3 417 aaPredicted RBP11.06□□□□□ -0.64
TPM3P2-201ENST00000397772 GALNT17Q6IS24 598 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms