RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PSMC6P62333 389 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 SP4Q02446 784 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 NR5A1Q13285 461 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 DGKDQ16760 1214 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 C1orf53Q5VUE5 145 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 DIS3L2Q8IYB7 885 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 EDIL3O43854 480 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 SETQ01105 290 aaPredicted RBP24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 INF2Q27J81 1249 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 PRR16Q569H4 304 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 PIK3AP1Q6ZUJ8 805 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 AGO4Q9HCK5 861 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 SCN10AQ9Y5Y9 1956 aa24.09■■□□□ 1.45
TSPAN4-206ENST00000397408 USP11P51784 963 aa24.09■■□□□ 1.45
TSPAN4-206ENST00000397408 TNFRSF25Q93038 417 aa24.09■■□□□ 1.45
TSPAN4-206ENST00000397408 NR2E3Q9Y5X4 410 aa24.09■■□□□ 1.45
TSPAN4-206ENST00000397408 BTBD18B2RXH4 712 aa24.08■■□□□ 1.44
TSPAN4-206ENST00000397408 PQBP1O60828 265 aaKnown RBP24.08■■□□□ 1.44
TSPAN4-206ENST00000397408 ZNF286BP0CG31 522 aa24.08■■□□□ 1.44
TSPAN4-206ENST00000397408 HOXD8P13378 290 aaPredicted RBP24.08■■□□□ 1.44
TSPAN4-206ENST00000397408 ITGA7Q13683 1181 aa24.08■■□□□ 1.44
TSPAN4-206ENST00000397408 SAFBQ15424 915 aaKnown RBP eCLIP24.08■■□□□ 1.44
TSPAN4-206ENST00000397408 GPR20Q99678 358 aa24.08■■□□□ 1.44
TSPAN4-206ENST00000397408 KIF3AQ9Y496 699 aa24.08■■□□□ 1.44
TSPAN4-206ENST00000397408 TELO2Q9Y4R8 837 aa24.08■■□□□ 1.44
TSPAN4-206ENST00000397408 GRIN2DO15399 1336 aa24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 FAM205CA6NFA0 338 aa24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 ARVCFO00192 962 aa24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 TDP2O95551 362 aa24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 TLE2Q04725 743 aa24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 ITGB3BPQ13352 177 aaPredicted RBP24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 EARS2Q5JPH6 523 aaKnown RBP24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 FBXO18Q8NFZ0 1043 aa24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 LENG9Q96B70 501 aa24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 UIMC1Q96RL1 719 aa24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 SDF4Q9BRK5 362 aa24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 JPH1Q9HDC5 661 aaPredicted RBP24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.07■■□□□ 1.44
TSPAN4-206ENST00000397408 NFASCO94856 1347 aa24.06■■□□□ 1.44
TSPAN4-206ENST00000397408 PPFIA4O75335 1185 aa24.06■■□□□ 1.44
TSPAN4-206ENST00000397408 GJB2P29033 226 aa24.06■■□□□ 1.44
TSPAN4-206ENST00000397408 CHMP4BP1P59074 171 aa24.06■■□□□ 1.44
TSPAN4-206ENST00000397408 CUL4AQ13619 759 aa24.06■■□□□ 1.44
TSPAN4-206ENST00000397408 NEK8Q86SG6 692 aa24.06■■□□□ 1.44
TSPAN4-206ENST00000397408 ZNF577Q9BSK1 485 aa24.06■■□□□ 1.44
TSPAN4-206ENST00000397408 SMC3Q9UQE7 1217 aa24.06■■□□□ 1.44
TSPAN4-206ENST00000397408 F2P00734 622 aa24.05■■□□□ 1.44
TSPAN4-206ENST00000397408 CDK7P50613 346 aa24.05■■□□□ 1.44
TSPAN4-206ENST00000397408 LETM2Q2VYF4 491 aa24.05■■□□□ 1.44
TSPAN4-206ENST00000397408 SLC43A3Q8NBI5 491 aa24.05■■□□□ 1.44
TSPAN4-206ENST00000397408 KAT2BQ92831 832 aa24.05■■□□□ 1.44
TSPAN4-206ENST00000397408 SLC9A2Q9UBY0 812 aa24.05■■□□□ 1.44
TSPAN4-206ENST00000397408 MROH7Q68CQ1 1323 aa24.05■■□□□ 1.44
TSPAN4-206ENST00000397408 K7ELQ4 463 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-206ENST00000397408 IPO5O00410 1097 aaKnown RBP24.04■■□□□ 1.44
TSPAN4-206ENST00000397408 LGALS2P05162 132 aa24.04■■□□□ 1.44
TSPAN4-206ENST00000397408 NBPF20Q3BBV1 942 aa24.04■■□□□ 1.44
TSPAN4-206ENST00000397408 MOXD1Q6UVY6 613 aa24.04■■□□□ 1.44
TSPAN4-206ENST00000397408 ANKRD33Q7Z3H0 272 aa24.04■■□□□ 1.44
TSPAN4-206ENST00000397408 PPP1R13LQ8WUF5 828 aa24.04■■□□□ 1.44
TSPAN4-206ENST00000397408 ZMYND8Q9ULU4 1186 aaPredicted RBP24.04■■□□□ 1.44
TSPAN4-206ENST00000397408 H0YGN5 161 aa24.03■■□□□ 1.44
TSPAN4-206ENST00000397408 DDX39AO00148 427 aaKnown RBP24.03■■□□□ 1.44
TSPAN4-206ENST00000397408 Q4G0T1 1027 aa24.03■■□□□ 1.44
TSPAN4-206ENST00000397408 SNX21Q969T3 373 aa24.03■■□□□ 1.44
TSPAN4-206ENST00000397408 TOX2Q96NM4 488 aa24.03■■□□□ 1.44
TSPAN4-206ENST00000397408 KATNAL1Q9BW62 490 aa24.03■■□□□ 1.44
TSPAN4-206ENST00000397408 CYP3A7-CYP3A51PA0A087WV96 503 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 DCDC2CA8MYV0 355 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 MSH4O15457 936 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 SYN1P17600 705 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 CYP3A7P24462 503 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 TCF7P36402 384 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 PSEN2P49810 448 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 MFSD10Q14728 455 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 FAM47CQ5HY64 1035 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 UTP14CQ5TAP6 766 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 TRIM50Q86XT4 487 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 FAM126BQ8IXS8 530 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 SEPT1Q8WYJ6 367 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 MBOAT7Q96N66 472 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 C16orf70Q9BSU1 422 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 SEZ6LQ9BYH1 1024 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 PRDM5Q9NQX1 630 aaPredicted RBP24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 PDLIM7Q9NR12 457 aa24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 DDX25Q9UHL0 483 aaKnown RBP24.02■■□□□ 1.44
TSPAN4-206ENST00000397408 GSTTP1A0A1W2PQM5 241 aa24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 DHX15O43143 795 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 CLTBP09497 229 aa24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 GCFC2P16383 781 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 GNL2Q13823 731 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 KIAA0753Q2KHM9 967 aa24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 NFRKBQ6P4R8 1299 aa24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 HAS3O00219 553 aa24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 TLR3O15455 904 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 SLC37A4O43826 429 aa24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 CCNT1O60563 726 aaKnown RBP24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 ACTR2P61160 394 aa24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 FAAP100Q0VG06 881 aa24.01■■□□□ 1.43
TSPAN4-206ENST00000397408 HSCBQ8IWL3 235 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms