RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 SPECC1Q5M775 1068 aa19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 PLA2G4DQ86XP0 818 aa19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 ADD3Q9UEY8 706 aaKnown RBP19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 OGDHLQ9ULD0 1010 aa19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 HPSEQ9Y251 543 aa19.13■□□□□ 0.65
TSPAN4-205ENST00000397406 A0A1B0GVL5 298 aa19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 COBLO75128 1261 aa19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 ADORA2AP29274 412 aa19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 TXKP42681 527 aa19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 FXR2P51116 673 aaKnown RBP eCLIP19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 TRPV1Q8NER1 839 aa19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 GJA10Q969M2 543 aa19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 FAM20AQ96MK3 541 aa19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 JADE2Q9NQC1 790 aa19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 COLQQ9Y215 455 aaPredicted RBP19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 IVNS1ABPQ9Y6Y0 642 aa19.12■□□□□ 0.65
TSPAN4-205ENST00000397406 STAM2O75886 525 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 ARP10275 920 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 PFKFB1P16118 471 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 USP49Q70CQ1 688 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 SLFN12Q8IYM2 578 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 IGSF22Q8N9C0 903 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 ENGASEQ8NFI3 743 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 DPF3Q92784 378 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 INPP4AQ96PE3 977 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 WDR11Q9BZH6 1224 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 TTC12Q9H892 705 aaPredicted RBP19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 DOCK5Q9H7D0 1870 aa19.11■□□□□ 0.65
TSPAN4-205ENST00000397406 LOC102724159A0A0B4J2E5 919 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 TECP42680 631 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 NDUFA8P51970 172 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 FAM160A1Q05DH4 1040 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 SNW1Q13573 536 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 PWP2Q15269 919 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 ZNF792Q3KQV3 632 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 CCDC73Q6ZRK6 1079 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 FMR1NBQ8N0W7 255 aaPredicted RBP19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 SYMPKQ92797 1274 aaKnown RBP19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 SLC5A5Q92911 643 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 EPSTI1Q96J88 318 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 UIMC1Q96RL1 719 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 PCDH10Q9P2E7 1040 aa19.1■□□□□ 0.65
TSPAN4-205ENST00000397406 RANBP2P49792 3224 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 MARCH6O60337 910 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 NR1I2O75469 434 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 RGS20O76081 388 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 CYP2C19P33261 490 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 MTMR1Q13613 665 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 PDIA5Q14554 519 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 STXBP2Q15833 593 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 TMEM266Q2M3C6 531 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 TRMT44Q8IYL2 757 aaKnown RBP19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 MORC4Q8TE76 937 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 GPRASP2Q96D09 838 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 AK8Q96MA6 479 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 PRO3102Q9H379 93 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 KCNH7Q9NS40 1196 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 PCDHA12Q9UN75 941 aa19.09■□□□□ 0.65
TSPAN4-205ENST00000397406 EIF3JO75822 258 aaKnown RBP19.08■□□□□ 0.65
TSPAN4-205ENST00000397406 PSMD10O75832 226 aa19.08■□□□□ 0.65
TSPAN4-205ENST00000397406 SPIRE1Q08AE8 756 aa19.08■□□□□ 0.65
TSPAN4-205ENST00000397406 SEMA3FQ13275 785 aa19.08■□□□□ 0.65
TSPAN4-205ENST00000397406 ZNF577Q9BSK1 485 aa19.08■□□□□ 0.65
TSPAN4-205ENST00000397406 AGO4Q9HCK5 861 aaKnown RBP19.08■□□□□ 0.65
TSPAN4-205ENST00000397406 DACT1Q9NYF0 836 aa19.08■□□□□ 0.65
TSPAN4-205ENST00000397406 FAM13BQ9NYF5 915 aa19.08■□□□□ 0.65
TSPAN4-205ENST00000397406 VAV3Q9UKW4 847 aa19.08■□□□□ 0.65
TSPAN4-205ENST00000397406 WDR81Q562E7 1941 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 POTEMA6NI47 508 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 PP2D1A8MPX8 630 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 B4DLN1 442 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 IPO5O00410 1097 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 CDC25AP30304 524 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 PDE4DQ08499 809 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 ZNF467Q7Z7K2 595 aaPredicted RBP19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 NLRX1Q86UT6 975 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 ANKLE1Q8NAG6 615 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 RAB34Q9BZG1 259 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 CCSER1Q9C0I3 900 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 TMEM63CQ9P1W3 806 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 LRWD1Q9UFC0 647 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 KCNH3Q9ULD8 1083 aa19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 DIS3Q9Y2L1 958 aaKnown RBP19.08■□□□□ 0.64
TSPAN4-205ENST00000397406 A0A087X0B3 334 aa19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 MAFGO15525 162 aa19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 COL6A1P12109 1028 aa19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 SYKP43405 635 aa19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 LRCH2Q5VUJ6 765 aa19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 CAVIN1Q6NZI2 390 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 MPHOSPH6Q99547 160 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 RIT2Q99578 217 aa19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 MMTAG2Q9BU76 263 aaKnown RBP19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 HTATIP2Q9BUP3 242 aa19.07■□□□□ 0.64
TSPAN4-205ENST00000397406 ALPK3Q96L96 1907 aa19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 ASB14A6NK59 587 aa19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 DHX15O43143 795 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 CYBAP13498 195 aa19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 CAPN2P17655 700 aa19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 ICAM3P32942 547 aa19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 ITGB3BPQ13352 177 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms