RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 CCDC34Q96HJ3 373 aa26.52■■□□□ 1.84
TSPAN4-202ENST00000397396 ARHGAP39Q9C0H5 1083 aa26.52■■□□□ 1.84
TSPAN4-202ENST00000397396 KDM3AQ9Y4C1 1321 aa26.52■■□□□ 1.84
TSPAN4-202ENST00000397396 TRAK2O60296 914 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 KCNA2P16389 499 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 SYKP43405 635 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 PRMT2P55345 433 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 SPIRE1Q08AE8 756 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 SEMA3FQ13275 785 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 FBXO16Q8IX29 292 aaPredicted RBP26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 RDM1Q8NG50 284 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 RASSF8Q8NHQ8 419 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 CALML4Q96GE6 196 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 DDX19AQ9NUU7 478 aaKnown RBP26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 WBP1LQ9NX94 342 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 USP25Q9UHP3 1055 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 NRBP1Q9UHY1 535 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 KCNH3Q9ULD8 1083 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 CASP8AP2Q9UKL3 1982 aa26.51■■□□□ 1.83
TSPAN4-202ENST00000397396 A0A1B0GVL5 298 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 POTEMA6NI47 508 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 SFNP31947 248 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 JAK3P52333 1124 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 ITGB3BPQ13352 177 aaPredicted RBP26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 KIAA1217Q5T5P2 1943 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 NCAPH2Q6IBW4 605 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 ZNF746Q6NUN9 644 aaPredicted RBP26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 CABP7Q86V35 215 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 KCTD17Q8N5Z5 321 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 CD99L2Q8TCZ2 262 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 NEK9Q8TD19 979 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 GPT2Q8TD30 523 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 GOLPH3LQ9H4A5 285 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 SRRDQ9UH36 339 aa26.5■■□□□ 1.83
TSPAN4-202ENST00000397396 RBM47A0AV96 593 aaKnown RBP26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 DHX15O43143 795 aaKnown RBP26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 KINO60870 393 aaKnown RBP26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 FLT3LGP49771 235 aa26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 NDUFA8P51970 172 aa26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 SPECC1Q5M775 1068 aa26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 EEPD1Q7L9B9 569 aa26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 SMAP1Q8IYB5 467 aaPredicted RBP26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 SNX29Q8TEQ0 813 aa26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 ZNF296Q8WUU4 475 aaPredicted RBP26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 EPSTI1Q96J88 318 aa26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 CDK5RAP3Q96JB5 506 aa26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 NT5C3AQ9H0P0 336 aa26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 JPH1Q9HDC5 661 aaPredicted RBP26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 PKD2L1Q9P0L9 805 aa26.49■■□□□ 1.83
TSPAN4-202ENST00000397396 WDR64B1ANS9 1081 aa26.48■■□□□ 1.83
TSPAN4-202ENST00000397396 SNAI1O95863 264 aaPredicted RBP26.48■■□□□ 1.83
TSPAN4-202ENST00000397396 PRKCZQ05513 592 aa26.48■■□□□ 1.83
TSPAN4-202ENST00000397396 MFSD14CQ5VZR4 134 aa26.48■■□□□ 1.83
TSPAN4-202ENST00000397396 B3GNT9Q6UX72 402 aa26.48■■□□□ 1.83
TSPAN4-202ENST00000397396 FMR1NBQ8N0W7 255 aaPredicted RBP26.48■■□□□ 1.83
TSPAN4-202ENST00000397396 GJA10Q969M2 543 aa26.48■■□□□ 1.83
TSPAN4-202ENST00000397396 NKRFO15226 690 aaKnown RBP eCLIP26.47■■□□□ 1.831e-6■■■□□ 18.9
TSPAN4-202ENST00000397396 LIG1P18858 919 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 MUTP22033 750 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 UBA1P22314 1058 aaKnown RBP26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 ACVR2BQ13705 512 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 EPHA7Q15375 998 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 MIER3Q7Z3K6 550 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 IQUBQ8NA54 791 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 ENGASEQ8NFI3 743 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 TIGD1Q96MW7 591 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 UNC45AQ9H3U1 944 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 DACT1Q9NYF0 836 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 SLC9A2Q9UBY0 812 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 DOCK3Q8IZD9 2030 aa26.47■■□□□ 1.83
TSPAN4-202ENST00000397396 ATP9AO75110 1047 aa26.46■■□□□ 1.83
TSPAN4-202ENST00000397396 DNAJC5GQ8N7S2 189 aa26.46■■□□□ 1.83
TSPAN4-202ENST00000397396 UIMC1Q96RL1 719 aa26.46■■□□□ 1.83
TSPAN4-202ENST00000397396 KATNBL1Q9H079 304 aa26.46■■□□□ 1.83
TSPAN4-202ENST00000397396 CUEDC2Q9H467 287 aa26.46■■□□□ 1.83
TSPAN4-202ENST00000397396 DISC1Q9NRI5 854 aa26.46■■□□□ 1.83
TSPAN4-202ENST00000397396 DDX41Q9UJV9 622 aaKnown RBP26.46■■□□□ 1.83
TSPAN4-202ENST00000397396 PP2D1A8MPX8 630 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 DDX39AO00148 427 aaKnown RBP26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 CHMP2AO43633 222 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 NR1I2O75469 434 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 ZNF202O95125 648 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 IGHA2P01877 340 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 TXNP10599 105 aaKnown RBP26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 CCT6AP40227 531 aaKnown RBP26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 SNW1Q13573 536 aaKnown RBP26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 HYIQ5T013 277 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 IQSEC1Q6DN90 963 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 TAPT1Q6NXT6 567 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 KANK3Q6NY19 840 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 METTL7BQ6UX53 244 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 USP49Q70CQ1 688 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 POLR3CQ9BUI4 534 aaPredicted RBP26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 MAGEF1Q9HAY2 307 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 TUFT1Q9NNX1 390 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 HOOK1Q9UJC3 728 aaKnown RBP26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 ZHX1Q9UKY1 873 aaPredicted RBP26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 GABRQQ9UN88 632 aa26.45■■□□□ 1.83
TSPAN4-202ENST00000397396 MCM3APO60318 1980 aa26.45■■□□□ 1.82
TSPAN4-202ENST00000397396 POLR2DO15514 142 aaKnown RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms