RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 RPS6KA1Q15418 735 aa10.24□□□□□ -0.77
UCA1-201ENST00000397381 IFI16Q16666 785 aaKnown RBP10.24□□□□□ -0.77
UCA1-201ENST00000397381 LETM2Q2VYF4 491 aa10.24□□□□□ -0.77
UCA1-201ENST00000397381 FAM83BQ5T0W9 1011 aa10.24□□□□□ -0.77
UCA1-201ENST00000397381 PARP9Q8IXQ6 854 aa10.24□□□□□ -0.77
UCA1-201ENST00000397381 SGSM3Q96HU1 749 aa10.24□□□□□ -0.77
UCA1-201ENST00000397381 TANGO6Q9C0B7 1094 aa10.24□□□□□ -0.77
UCA1-201ENST00000397381 C6orf50Q9HD87 102 aa10.24□□□□□ -0.77
UCA1-201ENST00000397381 COL4A3BPQ9Y5P4 624 aa10.24□□□□□ -0.77
UCA1-201ENST00000397381 ATAD5Q96QE3 1844 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 GNA14O95837 355 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 KLRC1P26715 233 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 GNA11P29992 359 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 TECP42680 631 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 PPP2R2AP63151 447 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 ZNF844Q08AG5 666 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 GRB10Q13322 594 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 SEPT2Q15019 361 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 ANKRD20A8PQ5CZ79 823 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 TMC4Q7Z404 712 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 KLHL7Q8IXQ5 586 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 CACNA2D3Q8IZS8 1091 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 ACTRT1Q8TDG2 376 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 SCFD2Q8WU76 684 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 LARP4BQ92615 738 aaKnown RBP10.23□□□□□ -0.77
UCA1-201ENST00000397381 CEP63Q96MT8 703 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 LSM14BQ9BX40 385 aaKnown RBP10.23□□□□□ -0.77
UCA1-201ENST00000397381 BLOC1S4Q9NUP1 217 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 AIPL1Q9NZN9 384 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 CCDC88AQ3V6T2 1871 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 PALM3A6NDB9 673 aaPredicted RBP10.23□□□□□ -0.77
UCA1-201ENST00000397381 CCDC188H7C350 402 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 NOL4O94818 638 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 NTSR2O95665 410 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 GHRP10912 638 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 ECHS1P30084 290 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 CTNNA1P35221 906 aaKnown RBP10.23□□□□□ -0.77
UCA1-201ENST00000397381 FXR2P51116 673 aaKnown RBP eCLIP10.23□□□□□ -0.77
UCA1-201ENST00000397381 NAPAP54920 295 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 FKBP3Q00688 224 aaKnown RBP10.23□□□□□ -0.77
UCA1-201ENST00000397381 MECOMQ03112 1051 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 EVX2Q03828 476 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 KIAA0753Q2KHM9 967 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 SLC35G1Q2M3R5 365 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 CYB5D1Q6P9G0 228 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 TBC1D5Q92609 795 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 CDK5RAP3Q96JB5 506 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 SEC16BQ96JE7 1060 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 SPZ1Q9BXG8 430 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 CENPHQ9H3R5 247 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 POLD4Q9HCU8 107 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 NLRC4Q9NPP4 1024 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 IL17RBQ9NRM6 502 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 SUFUQ9UMX1 484 aa10.23□□□□□ -0.77
UCA1-201ENST00000397381 CYTH3O43739 400 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 KIF4AO95239 1232 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 SLC8A1P32418 973 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 USP11P51784 963 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 ATP2B2Q01814 1243 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 UAP1Q16222 522 aaPredicted RBP10.22□□□□□ -0.77
UCA1-201ENST00000397381 ASIC2Q16515 512 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 TMEM266Q2M3C6 531 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 MYOCDQ8IZQ8 938 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 FUKQ8N0W3 1084 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 FAM84BQ96KN1 310 aaPredicted RBP10.22□□□□□ -0.77
UCA1-201ENST00000397381 PNMA5Q96PV4 448 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 RAB34Q9BZG1 259 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 KDM4CQ9H3R0 1056 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 CNOT10Q9H9A5 744 aaKnown RBP10.22□□□□□ -0.77
UCA1-201ENST00000397381 SWAP70Q9UH65 585 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 ATP8B3O60423 1300 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 ABCA3Q99758 1704 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 ROBO3Q96MS0 1386 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 KCNK3O14649 394 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 DNAJC8O75937 253 aaPredicted RBP10.22□□□□□ -0.77
UCA1-201ENST00000397381 EZRP15311 586 aaKnown RBP10.22□□□□□ -0.77
UCA1-201ENST00000397381 DNA2P51530 1060 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 MRPL12P52815 198 aaKnown RBP10.22□□□□□ -0.77
UCA1-201ENST00000397381 MARSP56192 900 aaKnown RBP10.22□□□□□ -0.77
UCA1-201ENST00000397381 POLR2FP61218 127 aaKnown RBP10.22□□□□□ -0.77
UCA1-201ENST00000397381 KLHL30Q0D2K2 578 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 XRCC4Q13426 336 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 TRADDQ15628 312 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 ZCWPW2Q504Y3 356 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 ODF2Q5BJF6 829 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 SPDYCQ5MJ68 293 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 SOGA3Q5TF21 947 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 GKAP1Q5VSY0 366 aaPredicted RBP10.22□□□□□ -0.77
UCA1-201ENST00000397381 FBXO33Q7Z6M2 555 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 RAD54LQ92698 747 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 TATDN2Q93075 761 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 CENPTQ96BT3 561 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.22□□□□□ -0.77
UCA1-201ENST00000397381 OSBPL7Q9BZF2 842 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 SLITRK6Q9H5Y7 841 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 VEZTQ9HBM0 779 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 ODF2LQ9ULJ1 636 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 LEMD3Q9Y2U8 911 aa10.22□□□□□ -0.77
UCA1-201ENST00000397381 A0A087X0T9 212 aa10.21□□□□□ -0.77
UCA1-201ENST00000397381 A0A0G2JS52 829 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms