RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 NECAB3Q96P71 396 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-208ENST00000397204 CTAGE1Q96RT6 745 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 RAD9AQ99638 391 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 KAT14Q9H8E8 782 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 DDX41Q9UJV9 622 aaKnown RBP10.22□□□□□ -0.77
CAPN3-208ENST00000397204 SCN10AQ9Y5Y9 1956 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 CCDC171Q6TFL3 1326 aa10.22□□□□□ -0.77
CAPN3-208ENST00000397204 BRWD1Q9NSI6 2320 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 ARHGEF15O94989 841 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 OATP04181 439 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 NR3C2P08235 984 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 CKBP12277 381 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 SDSP20132 328 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 WDR5P61964 334 aaKnown RBP10.21□□□□□ -0.77
CAPN3-208ENST00000397204 PTK7Q13308 1070 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 IKBKEQ14164 716 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 CDC37Q16543 378 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-208ENST00000397204 ASPRV1Q53RT3 343 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 ARHGEF16Q5VV41 709 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 KCNV1Q6PIU1 500 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 NYAP1Q6ZVC0 841 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 CHST3Q7LGC8 479 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 TBC1D10CQ8IV04 446 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 DHX37Q8IY37 1157 aaKnown RBP10.21□□□□□ -0.77
CAPN3-208ENST00000397204 RILPL2Q969X0 211 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 FAM122AQ96E09 287 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 ZSCAN10Q96SZ4 725 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-208ENST00000397204 ZKSCAN3Q9BRR0 538 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 KATNAL1Q9BW62 490 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 CPVLQ9H3G5 476 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 JMJD4Q9H9V9 463 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 MAP3K20Q9NYL2 800 aaKnown RBP10.21□□□□□ -0.77
CAPN3-208ENST00000397204 ZSWIM5Q9P217 1185 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 COL20A1Q9P218 1284 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 GTF2IRD1Q9UHL9 959 aa10.21□□□□□ -0.77
CAPN3-208ENST00000397204 HAS3O00219 553 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 LPXNO60711 386 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 KDM4AO75164 1064 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 GJB5O95377 273 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 PARP1P09874 1014 aaKnown RBP10.2□□□□□ -0.78
CAPN3-208ENST00000397204 TGFB3P10600 412 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 PLA2G5P39877 138 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 ERVK-21P61565 698 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 AAMPQ13685 434 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 QRICH1Q2TAL8 776 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 KRT40Q6A162 431 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
CAPN3-208ENST00000397204 SAMD3Q8N6K7 520 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 PPTC7Q8NI37 304 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 DHX38Q92620 1227 aaKnown RBP10.2□□□□□ -0.78
CAPN3-208ENST00000397204 TGS1Q96RS0 853 aaKnown RBP10.2□□□□□ -0.78
CAPN3-208ENST00000397204 TMEM134Q9H6X4 195 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 VAT1LQ9HCJ6 419 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 HDAC6Q9UBN7 1215 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 RAPGEFL1Q9UHV5 662 aa10.2□□□□□ -0.78
CAPN3-208ENST00000397204 TET1Q8NFU7 2136 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 NEDD4P46934 1319 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 LCHNA4D1U4 455 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 HIP1O00291 1037 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 DHX16O60231 1041 aaKnown RBP10.19□□□□□ -0.78
CAPN3-208ENST00000397204 NBNO60934 754 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 F2P00734 622 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 HOXD8P13378 290 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-208ENST00000397204 HSD17B4P51659 736 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 RRP1P56182 461 aaKnown RBP10.19□□□□□ -0.78
CAPN3-208ENST00000397204 GHRHRQ02643 423 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 TRAF1Q13077 416 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 KIAA0753Q2KHM9 967 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 MYSM1Q5VVJ2 828 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 STOX1Q6ZVD7 989 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 VSIG10LQ86VR7 867 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 ENAHQ8N8S7 591 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-208ENST00000397204 ALG1Q9BT22 464 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 AMNQ9BXJ7 453 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 KRT23Q9C075 422 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 OSBPL3Q9H4L5 887 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 EPHX3Q9H6B9 360 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 PXMP2Q9NR77 195 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 CTNNA3Q9UI47 895 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 INSL6Q9Y581 213 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 MRVI1Q9Y6F6 885 aa10.19□□□□□ -0.78
CAPN3-208ENST00000397204 LCTP09848 1927 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.18□□□□□ -0.78
CAPN3-208ENST00000397204 B4E1Z4 1266 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 CFBP00751 764 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 EIF2AK2P19525 551 aaKnown RBP10.18□□□□□ -0.78
CAPN3-208ENST00000397204 DEFB103AP81534 67 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 IMMTQ16891 758 aaKnown RBP10.18□□□□□ -0.78
CAPN3-208ENST00000397204 TRIM71Q2Q1W2 868 aaKnown RBP10.18□□□□□ -0.78
CAPN3-208ENST00000397204 TMEM31Q5JXX7 168 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 CELF3Q5SZQ8 465 aaKnown RBP10.18□□□□□ -0.78
CAPN3-208ENST00000397204 ZNF618Q5T7W0 954 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 TRAF7Q6Q0C0 670 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 SMC5Q8IY18 1101 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 CRBNQ96SW2 442 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 PDCD2LQ9BRP1 358 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 LRFN3Q9BTN0 628 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 DSCC1Q9BVC3 393 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 LNPKQ9C0E8 428 aa10.18□□□□□ -0.78
CAPN3-208ENST00000397204 RWDD1Q9H446 243 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms