RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 SH2B2O14492 632 aaPredicted RBP10.85□□□□□ -0.67
APTX-207ENST00000397172 GABBR2O75899 941 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 HEXIM1O94992 359 aaKnown RBP10.85□□□□□ -0.67
APTX-207ENST00000397172 YBX3P16989 372 aaKnown RBP eCLIP10.85□□□□□ -0.67
APTX-207ENST00000397172 XBP1P17861 261 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 PPP1R2P41236 205 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 RFX5P48382 616 aaPredicted RBP10.85□□□□□ -0.67
APTX-207ENST00000397172 CTCFP49711 727 aaPredicted RBP10.85□□□□□ -0.67
APTX-207ENST00000397172 STX17P56962 302 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 NLRP5P59047 1200 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 SGSM1Q2NKQ1 1148 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 TSNAXIP1Q2TAA8 658 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 ACCSLQ4AC99 568 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 SESTD1Q86VW0 696 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 SMCR8Q8TEV9 937 aaPredicted RBP10.85□□□□□ -0.67
APTX-207ENST00000397172 IFT81Q8WYA0 676 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 LZICQ8WZA0 190 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 CHP1Q99653 195 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 TRIM7Q9C029 511 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 THAP9Q9H5L6 903 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 NHEJ1Q9H9Q4 299 aaPredicted RBP10.85□□□□□ -0.67
APTX-207ENST00000397172 SENP2Q9HC62 589 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 ANGEL1Q9UNK9 670 aaKnown RBP10.85□□□□□ -0.67
APTX-207ENST00000397172 HPS5Q9UPZ3 1129 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 SPEF2Q9C093 1822 aa10.85□□□□□ -0.67
APTX-207ENST00000397172 MACROD2A1Z1Q3 448 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 PPP1R3GB7ZBB8 358 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 ZNF185O15231 689 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 FOXN1O15353 648 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 DIAPH2O60879 1101 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 HIP1RO75146 1068 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 ABL1P00519 1130 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 GSTA2P09210 222 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 TRIM21P19474 475 aaKnown RBP10.84□□□□□ -0.67
APTX-207ENST00000397172 CTNNA1P35221 906 aaKnown RBP10.84□□□□□ -0.67
APTX-207ENST00000397172 MATR3P43243 847 aaKnown RBP eCLIP10.84□□□□□ -0.678e-7■■■■□ 24.4
APTX-207ENST00000397172 GUCY2DQ02846 1103 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 MTA1Q13330 715 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 TAF11Q15544 211 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 FIGNQ5HY92 759 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 RRAGBQ5VZM2 374 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 MB21D2Q8IYB1 491 aaPredicted RBP10.84□□□□□ -0.67
APTX-207ENST00000397172 ARHGAP18Q8N392 663 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 B4GALNT2Q8NHY0 566 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 TMEM87BQ96K49 555 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 NOX5Q96PH1 765 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 TRAPPC9Q96Q05 1148 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 NDST4Q9H3R1 872 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 SH2D4AQ9H788 454 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 EPB41L5Q9HCM4 733 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 GPR108Q9NPR9 543 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 TAB2Q9NYJ8 693 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 TRIM10Q9UDY6 481 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 SLC12A6Q9UHW9 1150 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 DBNLQ9UJU6 430 aaKnown RBP10.84□□□□□ -0.67
APTX-207ENST00000397172 NFU1Q9UMS0 254 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 TTC26A0AVF1 554 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 CES2O00748 559 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 ZNF213O14771 459 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 CREB3O43889 395 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 ATP2C2O75185 946 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 GNAT1P11488 350 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 NQO1P15559 274 aaKnown RBP10.84□□□□□ -0.67
APTX-207ENST00000397172 PTPN12Q05209 780 aaKnown RBP10.84□□□□□ -0.67
APTX-207ENST00000397172 SFSWAPQ12872 951 aaKnown RBP10.84□□□□□ -0.67
APTX-207ENST00000397172 DPYDQ12882 1025 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 THEMIS2Q5TEJ8 643 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 LDHAL6AQ6ZMR3 332 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 NFXL1Q6ZNB6 911 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 SH3RF1Q7Z6J0 888 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 TRIM74Q86UV6 250 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 TRIM73Q86UV7 250 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 KIRREL3Q8IZU9 778 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 STK11IPQ8N1F8 1099 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.84□□□□□ -0.67
APTX-207ENST00000397172 RAPGEF5Q92565 580 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 PAGE5Q96GU1 130 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 NAF1Q96HR8 494 aaKnown RBP10.84□□□□□ -0.67
APTX-207ENST00000397172 GORASP1Q9BQQ3 440 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 IFIH1Q9BYX4 1025 aaKnown RBP10.84□□□□□ -0.67
APTX-207ENST00000397172 KRT23Q9C075 422 aa10.84□□□□□ -0.67
APTX-207ENST00000397172 SNED1Q8TER0 1413 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 LTBP3Q9NS15 1303 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 MYH8P13535 1937 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 ZBTB43O43298 467 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 SLC7A5Q01650 507 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 MAP3K12Q12852 859 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 TBC1D25Q3MII6 688 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 SH2D4BQ5SQS7 431 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 FKBP15Q5T1M5 1219 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 ZNF658Q5TYW1 1059 aaPredicted RBP10.83□□□□□ -0.68
APTX-207ENST00000397172 NELFBQ8WX92 580 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 MED15Q96RN5 788 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 RTFDC1Q9BY42 306 aaPredicted RBP10.83□□□□□ -0.68
APTX-207ENST00000397172 ANKRD2Q9GZV1 360 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 RAB17Q9H0T7 212 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 ISCUQ9H1K1 167 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 VPS33BQ9H267 617 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 VCX3BQ9H321 246 aa10.83□□□□□ -0.68
APTX-207ENST00000397172 VCX3AQ9NNX9 186 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms