RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 CALM3P0DP25 149 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 CASTP20810 708 aaKnown RBP13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 GNAQP50148 359 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 LAMC2Q13753 1193 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 TSGA10IPQ3SY00 556 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 TMTC2Q8N394 836 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 SLC17A8Q8NDX2 589 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 CYP2W1Q8TAV3 490 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 KCNB2Q92953 911 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 EMID1Q96A84 441 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 TIFAQ96CG3 184 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 LZTS2Q9BRK4 669 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 MLXIPQ9HAP2 919 aa13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 NCOA5Q9HCD5 579 aaKnown RBP13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 MAP3K20Q9NYL2 800 aaKnown RBP13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 V9GY48 417 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQA1-203ENST00000395363 KIAA1671Q9BY89 1806 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 SPATA31C2B4DYI2 1134 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 STXBP3O00186 592 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 PIK3CDO00329 1044 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 KPNA6O60684 536 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 ITGB5P18084 799 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 NAPAP54920 295 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 FGD1P98174 961 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 MBTPS1Q14703 1052 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 PCNX4Q63HM2 1172 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 C7orf31Q8N865 590 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 USP38Q8NB14 1042 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 PHKBQ93100 1093 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 ZBTB10Q96DT7 871 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 MAF1Q9H063 256 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 PRDM12Q9H4Q4 367 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 ZNF576Q9H609 170 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 PCDHA6Q9UN73 950 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 PCDHA8Q9Y5H6 950 aa13.34□□□□□ -0.27
HLA-DQA1-203ENST00000395363 FIBPO43427 364 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 NBNO60934 754 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 CTSHP09668 335 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SUPT20HL2P0C7V6 817 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 KCNA2P16389 499 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 RPS6KB1P23443 525 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SMARCA1P28370 1054 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 TRIM71Q2Q1W2 868 aaKnown RBP13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 TRAF7Q6Q0C0 670 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 GPR20Q99678 358 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 UPF3BQ9BZI7 483 aaKnown RBP13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 FTOQ9C0B1 505 aaKnown RBP eCLIP13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 CERS4Q9HA82 394 aa13.33□□□□□ -0.28
HLA-DQA1-203ENST00000395363 NOP56O00567 594 aaKnown RBP13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 TREHO43280 583 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SMIM10L2AP0DMW4 78 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SMIM10L2BP0DMW5 78 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 CKBP12277 381 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 FOSL2P15408 326 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 MARK3P27448 753 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ICAM3P32942 547 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 DEFB103AP81534 67 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PTPN11Q06124 597 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 TRAF1Q13077 416 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 KRT32Q14532 448 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 GNPTABQ3T906 1256 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ZNF618Q5T7W0 954 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 JAKMIP3Q5VZ66 844 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 LRRC8DQ7L1W4 858 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 MAFAQ8NHW3 353 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 RASGRP4Q8TDF6 673 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ANO3Q9BYT9 981 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PRDM6Q9NQX0 595 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SETD4Q9NVD3 440 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SLC4A7Q9Y6M7 1214 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 NCOR1O75376 2440 aa13.32□□□□□ -0.28
HLA-DQA1-203ENST00000395363 XIRP2A4UGR9 3374 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SPDYE3A6NKU9 549 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 H3BRB1 525 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 RFXAPO00287 272 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ARP10275 920 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ATP2A2P16615 1042 aaKnown RBP13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ADCY7P51828 1080 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 TOB2Q14106 344 aaPredicted RBP13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 ADGRE1Q14246 886 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PKN1Q16512 942 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 KCNV1Q6PIU1 500 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 RETREG2Q8NC44 543 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 PPM1EQ8WY54 764 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 SEZ6LQ9BYH1 1024 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 RNPEPQ9H4A4 650 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 TUT1Q9H6E5 874 aaKnown RBP13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 UBIAD1Q9Y5Z9 338 aa13.31□□□□□ -0.28
HLA-DQA1-203ENST00000395363 GSTTP1A0A1W2PQM5 241 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms