RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 EPC1Q9H2F5 836 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 TMOD2Q9NZR1 351 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 TMX2Q9Y320 296 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 COL4A3BPQ9Y5P4 624 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 KRT86O43790 486 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 SSBP05455 408 aaKnown RBP eCLIP17■□□□□ 0.31
UBE2D3-207ENST00000394801 VIL1P09327 827 aaKnown RBP17■□□□□ 0.31
UBE2D3-207ENST00000394801 SPATA31C1P0DKV0 1188 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 CCDC122Q5T0U0 273 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 ZC3H3Q8IXZ2 948 aaKnown RBP17■□□□□ 0.31
UBE2D3-207ENST00000394801 TRIM10Q9UDY6 481 aa17■□□□□ 0.31
UBE2D3-207ENST00000394801 GNA14O95837 355 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 HERC4Q5GLZ8 1057 aaPredicted RBP16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 KCTD17Q8N5Z5 321 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 EHBP1Q8NDI1 1231 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 PSMD1Q99460 953 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 KCTD10Q9H3F6 313 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 ARHGEF10LQ9HCE6 1279 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 MYO6Q9UM54 1294 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 EPHB6O15197 1021 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 IPO7O95373 1038 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 PNMA6AP0CW24 399 aaPredicted RBP16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 STAT2P52630 851 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 SYT2Q8N9I0 419 aaPredicted RBP16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 SCFD1Q8WVM8 642 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 UPF1Q92900 1129 aaKnown RBP eCLIP16.99■□□□□ 0.319e-15■■□□□ 12.1
UBE2D3-207ENST00000394801 PURBQ96QR8 312 aaKnown RBP16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 CAMKK2Q96RR4 588 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 FGFBP2Q9BYJ0 223 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 EMILIN3Q9NT22 766 aa16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 ZNF70Q9UC06 446 aaPredicted RBP16.99■□□□□ 0.31
UBE2D3-207ENST00000394801 POTEFA5A3E0 1075 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 TRAF5O00463 557 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 MSH4O15457 936 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 LCA5LO95447 670 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 POTEIP0CG38 1075 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 CC2D1AQ6P1N0 951 aaPredicted RBP16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 POTEGQ6S5H5 508 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 POTEEQ6S8J3 1075 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 RTKN2Q8IZC4 609 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 UIMC1Q96RL1 719 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 MMRN2Q9H8L6 949 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 STK32BQ9NY57 414 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 VAV3Q9UKW4 847 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 DNM3Q9UQ16 869 aa16.98■□□□□ 0.31
UBE2D3-207ENST00000394801 NPHP3-ACAD11A0A0J9YXS1 232 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 RCCD1A6NED2 376 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 TCP10L2B9ZVM9 353 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 ECE1P42892 770 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 GOLGB1Q14789 3259 aaKnown RBP16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 KIAA1755Q5JYT7 1200 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 FKBP1CQ5VVH2 108 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 PAPD7Q5XG87 772 aaKnown RBP16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 TRAPPC11Q7Z392 1133 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 KIAA1328Q86T90 577 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 BAP1Q92560 729 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 JAKMIP2Q96AA8 810 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 CCDC42Q96M95 316 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 LACRTQ9GZZ8 138 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 FAM207AQ9NSI2 230 aaPredicted RBP16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 ARHGAP20Q9P2F6 1191 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 PUF60Q9UHX1 559 aaKnown RBP16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 POTEB2H3BUK9 544 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 VAV2P52735 878 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 KCNMA1Q12791 1236 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 GIT2Q14161 759 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 EZH2Q15910 746 aaKnown RBP16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 EDRF1Q3B7T1 1238 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 ZNF771Q7L3S4 317 aaPredicted RBP16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 SPICE1Q8N0Z3 855 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 TTLL6Q8N841 843 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 MSANTD4Q8NCY6 345 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 CNTNAP1P78357 1384 aa16.97■□□□□ 0.31
UBE2D3-207ENST00000394801 CCDC151A5D8V7 595 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 ZNF263O14978 683 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 TBC1D12O60347 775 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 PLA2G6O60733 806 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 PSMC6P62333 389 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 BRD3Q15059 726 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 DLGAP5Q15398 846 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 NCAPH2Q6IBW4 605 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 TRIM59Q8IWR1 403 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 ACER1Q8TDN7 264 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 POLR3CQ9BUI4 534 aaPredicted RBP16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 ANKZF1Q9H8Y5 726 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 GOPCQ9HD26 462 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 RAB21Q9UL25 225 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 IGLV3-22A0A075B6J6 115 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 HOXA13P31271 388 aaPredicted RBP16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 TSGA10Q9BZW7 698 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 ZSWIM4Q9H7M6 989 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 TBC1D7Q9P0N9 293 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 ZBTB21Q9ULJ3 1066 aa16.96■□□□□ 0.31
UBE2D3-207ENST00000394801 CTAGE15A4D2H0 777 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 CTAGE8P0CG41 777 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 SPA17Q15506 151 aa16.95■□□□□ 0.3
UBE2D3-207ENST00000394801 CTAGE6Q86UF2 777 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms