RNA–Protein interactions for RNA: ENST00000394800.6

MATR3-230, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-230ENST00000394800 C12orf60Q5U649 245 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 IL31Q6EBC2 164 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 USP17L1Q7RTZ2 530 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 TGFBRAP1Q8WUH2 860 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 SCYL1Q96KG9 808 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 HNRNPCL2B2RXH8 293 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 HNRNPCL1O60812 293 aaKnown RBP6.39□□□□□ -1.39
MATR3-230ENST00000394800 TOP1P11387 765 aaKnown RBP6.39□□□□□ -1.39
MATR3-230ENST00000394800 GFAPP14136 432 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 CMA1P23946 247 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 TAGLNQ01995 201 aaKnown RBP6.39□□□□□ -1.39
MATR3-230ENST00000394800 EFR3AQ14156 821 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 SOGA3Q5TF21 947 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 MAPKAPK5Q8IW41 473 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 ZSCAN29Q8IWY8 852 aaPredicted RBP6.39□□□□□ -1.39
MATR3-230ENST00000394800 DCLK2Q8N568 766 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 TBC1D16Q8TBP0 767 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 NLRP4Q96MN2 994 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 MXD3Q9BW11 206 aa6.39□□□□□ -1.39
MATR3-230ENST00000394800 RTFDC1Q9BY42 306 aaPredicted RBP6.39□□□□□ -1.39
MATR3-230ENST00000394800 CRNKL1Q9BZJ0 848 aaKnown RBP6.39□□□□□ -1.39
MATR3-230ENST00000394800 MRPS23Q9Y3D9 190 aaKnown RBP6.39□□□□□ -1.39
MATR3-230ENST00000394800 DLEC1Q9Y238 1755 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 PFDN1O60925 122 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 TNFAIP3P21580 790 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 CETN2P41208 172 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 ITGB3BPQ13352 177 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 C14orf80Q86SX3 495 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 COL23A1Q86Y22 540 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 PALM2Q8IXS6 379 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 STAG2Q8N3U4 1231 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 IPCEF1Q8WWN9 437 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 CEP63Q96MT8 703 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 EDEM3Q9BZQ6 932 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 PDGFDQ9GZP0 370 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 CPVLQ9H3G5 476 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 PYCARDQ9ULZ3 195 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 MAGED2Q9UNF1 606 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 LUC7L2Q9Y383 392 aaKnown RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 LTBP1Q14766 1721 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 DEXIO95424 95 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 PRR29P0C7W0 189 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 BMP6P22004 513 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 HOXA10P31260 410 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 VPS41P49754 854 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 TFAP4Q01664 338 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 ARID5AQ03989 594 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 MAP7Q14244 749 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 ARID5BQ14865 1188 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 KIAA0753Q2KHM9 967 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 TYW1BQ6NUM6 668 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 PPP1R18Q6NYC8 613 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 SAP30BPQ9UHR5 308 aaKnown RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 MYH1P12882 1939 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 ORC4O43929 436 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 RBP3P10745 1247 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 CCDC93Q567U6 631 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 SPOUT1Q5T280 376 aaKnown RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 DHX40Q8IX18 779 aaKnown RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 NEK11Q8NG66 645 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 AGBL1Q96MI9 1066 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 TSNARE1Q96NA8 513 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 RNF26Q9BY78 433 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 CABP5Q9NP86 173 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 PCDH12Q9NPG4 1184 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 ETAA1Q9NY74 926 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 MTRF1LQ9UGC7 380 aaKnown RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 PAIP2BQ9ULR5 123 aaKnown RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 CNTNAP5Q8WYK1 1306 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 SCN9AQ15858 1988 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 KLRG2A4D1S0 409 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 C6orf229H3BNL8 230 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 COBLO75128 1261 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 HARSP12081 509 aaKnown RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 FOSL2P15408 326 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 PTGS1P23219 599 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 MDM2Q00987 491 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 TCEAL1Q15170 157 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 ELF2Q15723 593 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 PLEKHG6Q3KR16 790 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 SBK1Q52WX2 424 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 MFSD14BQ5SR56 506 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 CCSAPQ6IQ19 270 aaPredicted RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 CCDC121Q6ZUS5 278 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 KIAA0825Q8IV33 1275 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.38□□□□□ -1.398e-81■■□□□ 11.7
MATR3-230ENST00000394800 XPO4Q9C0E2 1151 aaKnown RBP6.38□□□□□ -1.39
MATR3-230ENST00000394800 ZCWPW1Q9H0M4 648 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 PLSCR2Q9NRY7 297 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 PCDHGB7Q9Y5F8 929 aa6.38□□□□□ -1.39
MATR3-230ENST00000394800 RIMBP2O15034 1052 aa6.37□□□□□ -1.39
MATR3-230ENST00000394800 RNASEH2AO75792 299 aaKnown RBP6.37□□□□□ -1.39
MATR3-230ENST00000394800 HNRNPCP07910 306 aaKnown RBP eCLIP6.37□□□□□ -1.393e-7■■■□□ 18.6
MATR3-230ENST00000394800 FAM200BP0CF97 657 aa6.37□□□□□ -1.39
MATR3-230ENST00000394800 SPECC1LQ69YQ0 1117 aa6.37□□□□□ -1.39
MATR3-230ENST00000394800 TMTC3Q6ZXV5 915 aa6.37□□□□□ -1.39
MATR3-230ENST00000394800 ATP6V0A1Q93050 837 aa6.37□□□□□ -1.39
MATR3-230ENST00000394800 CDHR1Q96JP9 859 aa6.37□□□□□ -1.39
MATR3-230ENST00000394800 VPS37BQ9H9H4 285 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms