RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 AGBL1Q96MI9 1066 aa7.82□□□□□ -1.16
RTN4-205ENST00000394609 ANO3Q9BYT9 981 aa7.82□□□□□ -1.16
RTN4-205ENST00000394609 RANBP17Q9H2T7 1088 aaKnown RBP7.82□□□□□ -1.16
RTN4-205ENST00000394609 GINM1Q9NU53 330 aa7.82□□□□□ -1.16
RTN4-205ENST00000394609 ANO10Q9NW15 660 aa7.82□□□□□ -1.16
RTN4-205ENST00000394609 DDX25Q9UHL0 483 aaKnown RBP7.82□□□□□ -1.16
RTN4-205ENST00000394609 SPDYE3A6NKU9 549 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 LAD1O00515 517 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 WDR46O15213 610 aaKnown RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 PLA2G6O60733 806 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 FLOT1O75955 427 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 ADCY5O95622 1261 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 SLFN14P0C7P3 912 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 SNRPBP14678 240 aaKnown RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 UBA7P41226 1012 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 HMGCS2P54868 508 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 EAPPQ56P03 285 aaPredicted RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 LDHDQ86WU2 507 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 CEP57L1Q8IYX8 460 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 PRPF38AQ8NAV1 312 aaKnown RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 EHBP1Q8NDI1 1231 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 RASSF8Q8NHQ8 419 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 PAGE5Q96GU1 130 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 MTMR9Q96QG7 549 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 SLF1Q9BQI6 1058 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 WDR18Q9BV38 432 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 GLT8D2Q9H1C3 349 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 RPAP3Q9H6T3 665 aaPredicted RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 CGNQ9P2M7 1197 aaKnown RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 HOOK1Q9UJC3 728 aaKnown RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 PPP2R3BQ9Y5P8 575 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 SSC5DA1L4H1 1573 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 AP5Z1O43299 807 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 MARCH6O60337 910 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 TXLNAP40222 546 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 PRPHP41219 470 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 NLRP12P59046 1061 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 ARHGAP4P98171 946 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 PPP4R3AQ6IN85 833 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 MOB2Q70IA6 237 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 IQUBQ8NA54 791 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.81□□□□□ -1.162e-32■□□□□ 11.2
RTN4-205ENST00000394609 AS3MTQ9HBK9 375 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 RAVER2Q9HCJ3 691 aaKnown RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 HOMER2Q9NSB8 354 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 TUBE1Q9UJT0 475 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 ZHX1Q9UKY1 873 aaPredicted RBP7.81□□□□□ -1.16
RTN4-205ENST00000394609 CCPG1Q9ULG6 757 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 PAXBP1Q9Y5B6 917 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 PITPNM2Q9BZ72 1349 aa7.81□□□□□ -1.16
RTN4-205ENST00000394609 ZNF536O15090 1300 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 CCDC66A2RUB6 948 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 GLTPD2A6NH11 291 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 GCOM1H8Y6P7 765 aaPredicted RBP7.8□□□□□ -1.16
RTN4-205ENST00000394609 CCNYL3P0C7X3 344 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 POLR2MP0CAP2 368 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 BMP6P22004 513 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 STAT6P42226 847 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 USP11P51784 963 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 USP14P54578 494 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 UBXN2AP68543 259 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 AP3B2Q13367 1082 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 VGLL4Q14135 290 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 IQCB1Q15051 598 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 PRR16Q569H4 304 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 RRAGBQ5VZM2 374 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 KANK3Q6NY19 840 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.8□□□□□ -1.16
RTN4-205ENST00000394609 DHX40Q8IX18 779 aaKnown RBP7.8□□□□□ -1.16
RTN4-205ENST00000394609 CYP2W1Q8TAV3 490 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 SMARCE1Q969G3 411 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 WNK4Q96J92 1243 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 BLZF1Q9H2G9 400 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 TTC12Q9H892 705 aaPredicted RBP7.8□□□□□ -1.16
RTN4-205ENST00000394609 SLC24A3Q9HC58 644 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 MAN1B1Q9UKM7 699 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 MRPL11Q9Y3B7 192 aaKnown RBP7.8□□□□□ -1.16
RTN4-205ENST00000394609 SBF1O95248 1867 aa7.8□□□□□ -1.16
RTN4-205ENST00000394609 SMTNL1A8MU46 457 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 BECN2A8MW95 431 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 FAM86B1E9PN63 330 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 GOLGA6L19H0YKK7 550 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 PIK3CDO00329 1044 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 NFIBO00712 420 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 PPP1R12BO60237 982 aaPredicted RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 GRIN3BO60391 1043 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 CAVIN2O95810 425 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 FOSP01100 380 aaPredicted RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 ICAM1P05362 532 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 FAM86B2P0C5J1 330 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 ALAS1P13196 640 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 TRAF1Q13077 416 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 ORC2Q13416 577 aaPredicted RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 NAALADL2Q58DX5 795 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 PDXDC2PQ6P474 469 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 USP50Q70EL3 339 aaPredicted RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 SH3RF1Q7Z6J0 888 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 CABP7Q86V35 215 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms