RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PTGDRQ13258 359 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 ITIH4Q14624 930 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 PPP1R7Q15435 360 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 IRF2BP1Q8IU81 584 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 SETDB2Q96T68 719 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 POLD4Q9HCU8 107 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 KCNMB3Q9NPA1 279 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 MYH6P13533 1939 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 COL5A3P25940 1745 aaPredicted RBP20.71■□□□□ 0.91
HOXC6-202ENST00000394331 H0YGN5 161 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 RTN3O95197 1032 aaPredicted RBP20.71■□□□□ 0.91
HOXC6-202ENST00000394331 FERP16591 822 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 NFRKBQ6P4R8 1299 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.71■□□□□ 0.91
HOXC6-202ENST00000394331 BORCS6Q96GS4 357 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 THAP9Q9H5L6 903 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 NFS1Q9Y697 457 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 MYH2Q9UKX2 1941 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 KLRK1P26718 216 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 HNRNPH3P31942 346 aaKnown RBP20.71■□□□□ 0.91
HOXC6-202ENST00000394331 MATR3P43243 847 aaKnown RBP eCLIP20.71■□□□□ 0.91
HOXC6-202ENST00000394331 PFKFB3Q16875 520 aaPredicted RBP20.71■□□□□ 0.91
HOXC6-202ENST00000394331 SPTY2D1Q68D10 685 aaPredicted RBP20.71■□□□□ 0.91
HOXC6-202ENST00000394331 SLC30A9Q6PML9 568 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 RAPGEF5Q92565 580 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 EPB41L5Q9HCM4 733 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 NARFQ9UHQ1 456 aa20.71■□□□□ 0.91
HOXC6-202ENST00000394331 A0A1B0GUL6 1792 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 TSPY2A6NKD2 308 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 HPDP32754 393 aaPredicted RBP20.7■□□□□ 0.9
HOXC6-202ENST00000394331 KIAA0753Q2KHM9 967 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 CCDC38Q502W7 563 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 FAM47AQ5JRC9 791 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 MAATS1Q7Z4T9 603 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 CNOT10Q9H9A5 744 aaKnown RBP20.7■□□□□ 0.9
HOXC6-202ENST00000394331 TFCP2L1Q9NZI6 479 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 LRWD1Q9UFC0 647 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 ZNF831Q5JPB2 1677 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 GTPBP6O43824 516 aaPredicted RBP20.7■□□□□ 0.9
HOXC6-202ENST00000394331 CCND1P24385 295 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 CALML3P27482 149 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 CWF19L1Q69YN2 538 aaKnown RBP20.7■□□□□ 0.9
HOXC6-202ENST00000394331 TEX9Q8N6V9 391 aa20.7■□□□□ 0.9
HOXC6-202ENST00000394331 ENO4A6NNW6 628 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 WNT7AO00755 349 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 ABLIM1O14639 778 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 XDHP47989 1333 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 BAZ2AQ9UIF9 1905 aaKnown RBP20.69■□□□□ 0.9
HOXC6-202ENST00000394331 PJA2O43164 708 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 NMT2O60551 498 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 MYBP10242 640 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 PRDX5P30044 214 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 GUCY2DQ02846 1103 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 CCDC96Q2M329 555 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 RC3H1Q5TC82 1133 aaKnown RBP20.69■□□□□ 0.9
HOXC6-202ENST00000394331 TPTE2Q6XPS3 522 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 ANKS4BQ8N8V4 417 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 CCDC197Q8NCU1 140 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 NOC3LQ8WTT2 800 aaKnown RBP20.69■□□□□ 0.9
HOXC6-202ENST00000394331 ZFAND2BQ8WV99 257 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 CASKIN2Q8WXE0 1202 aa20.69■□□□□ 0.9
HOXC6-202ENST00000394331 ZNF263O14978 683 aa20.68■□□□□ 0.9
HOXC6-202ENST00000394331 ROR2Q01974 943 aaKnown RBP20.68■□□□□ 0.9
HOXC6-202ENST00000394331 PIK3AP1Q6ZUJ8 805 aa20.68■□□□□ 0.9
HOXC6-202ENST00000394331 LRRC45Q96CN5 670 aa20.68■□□□□ 0.9
HOXC6-202ENST00000394331 PCDHGC5Q9Y5F6 944 aa20.68■□□□□ 0.9
HOXC6-202ENST00000394331 CASP1P29466 404 aa20.68■□□□□ 0.9
HOXC6-202ENST00000394331 DLEC1Q9Y238 1755 aa20.68■□□□□ 0.9
HOXC6-202ENST00000394331 ASAP2O43150 1006 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 RPS6KA4O75676 772 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 GCLCP48506 637 aaPredicted RBP20.67■□□□□ 0.9
HOXC6-202ENST00000394331 SEPT2Q15019 361 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 CACNA2D4Q7Z3S7 1137 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 CPLX4Q7Z7G2 160 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 SMCR8Q8TEV9 937 aaPredicted RBP20.67■□□□□ 0.9
HOXC6-202ENST00000394331 IFIH1Q9BYX4 1025 aaKnown RBP20.67■□□□□ 0.9
HOXC6-202ENST00000394331 PCDHA13Q9Y5I0 950 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 LINGO3P0C6S8 592 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 CYP2D6P10635 497 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 ARL6IP4Q66PJ3 421 aaKnown RBP20.67■□□□□ 0.9
HOXC6-202ENST00000394331 DGKHQ86XP1 1220 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 DZIP1Q86YF9 867 aaKnown RBP20.67■□□□□ 0.9
HOXC6-202ENST00000394331 CHMP6Q96FZ7 201 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 CCDC42Q96M95 316 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 TLR10Q9BXR5 811 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 SH3GLB2Q9NR46 395 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 F8W031 263 aaPredicted RBP20.67■□□□□ 0.9
HOXC6-202ENST00000394331 ZPR1O75312 459 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 MRPS25P82663 173 aaKnown RBP20.67■□□□□ 0.9
HOXC6-202ENST00000394331 IFI16Q16666 785 aaKnown RBP20.67■□□□□ 0.9
HOXC6-202ENST00000394331 RNF10Q8N5U6 811 aaKnown RBP20.67■□□□□ 0.9
HOXC6-202ENST00000394331 AGAP11Q8TF27 550 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 IFT81Q8WYA0 676 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 EXOC1Q9NV70 894 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 MCM9Q9NXL9 1143 aa20.67■□□□□ 0.9
HOXC6-202ENST00000394331 GUCY2FP51841 1108 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 CYP27A1Q02318 531 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 ZNF844Q08AG5 666 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 AGPAT5Q9NUQ2 364 aa20.66■□□□□ 0.9
HOXC6-202ENST00000394331 ZFATQ9P243 1243 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms