RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 POTECB2RU33 542 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 hCG_1984214I3L0E3 225 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 ATP2B4P23634 1241 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 ZCWPW2Q504Y3 356 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 HERC4Q5GLZ8 1057 aaPredicted RBP15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 POTEBQ6S5H4 581 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 ZNF713Q8N859 430 aaPredicted RBP15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 LRRC27Q9C0I9 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 DDX4Q9NQI0 724 aaKnown RBP15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 BMP2KQ9NSY1 1161 aaPredicted RBP15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L15C9J2P7 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L13C9JLJ4 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L11C9JVI0 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L18D6R9N7 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L22D6RA61 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L17D6RBQ6 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L19D6RCP7 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L20D6RJB6 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 PPFIA4O75335 1185 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 ZNF543Q08ER8 600 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L24Q0WX57 530 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 USP17L6PQ6QN14 398 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 CERS3Q8IU89 383 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 CUL5Q93034 780 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 PACSIN1Q9BY11 444 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 CEP72Q9P209 647 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 KRT18P05783 430 aaKnown RBP15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 KLRC1P26715 233 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 STAT3P40763 770 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 NOVP48745 357 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 PTPROQ16827 1216 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 ZNF572Q7Z3I7 529 aaPredicted RBP15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 GPBP1Q86WP2 473 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 FAM133AQ8N9E0 248 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 IFT81Q8WYA0 676 aa15.38■□□□□ 0.05
GAPVD1-205ENST00000394084 SSU72P8A0A1W2PR75 194 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 C15orf52Q6ZUT6 534 aaKnown RBP15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 SLF2Q8IX21 1173 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 PROM2Q8N271 834 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 ARL8AQ96BM9 186 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 MXD3Q9BW11 206 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 PSTPIP2Q9H939 334 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 ADAMTS1Q9UHI8 967 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 SERPING1P05155 500 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 PLA2G4BP0C869 781 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 EPHB4P54760 987 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 ITIH3Q06033 890 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 CFAP221Q4G0U5 840 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 PPP4R3AQ6IN85 833 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 DNAAF5Q86Y56 855 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 TBC1D16Q8TBP0 767 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 RUFY1Q96T51 708 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 POLD4Q9HCU8 107 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 GAKO14976 1311 aa15.37■□□□□ 0.05
GAPVD1-205ENST00000394084 A0A087X0T9 212 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 TTLL1O95922 423 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 GLI1P08151 1106 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 FAM228BP0C875 321 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 EPS15P42566 896 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 CARSP49589 748 aaKnown RBP15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 NFU1Q9UMS0 254 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 ATP6V0A2Q9Y487 856 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 SNHG28P0DPA3 235 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 MRPL12P52815 198 aaKnown RBP15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 GUCY2DQ02846 1103 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 ACTN1P12814 892 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 SCNN1DP51172 638 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 IRAK1P51617 712 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 GABPAQ06546 454 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 KLHL30Q0D2K2 578 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 ADAM9Q13443 819 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 KCTD19Q17RG1 926 aaPredicted RBP15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 KIAA0753Q2KHM9 967 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 KCTD16Q68DU8 428 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 CCDC65Q8IXS2 484 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 SCFD1Q8WVM8 642 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 FAM163AQ96GL9 167 aaPredicted RBP15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 EDEM3Q9BZQ6 932 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 EPB41L5Q9HCM4 733 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 PODXL2Q9NZ53 605 aa15.36■□□□□ 0.05
GAPVD1-205ENST00000394084 HSF2BPO75031 334 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 HEXIM1O94992 359 aaKnown RBP15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 FAM153BP0C7A2 387 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 CCT5P48643 541 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 CLK2P49760 499 aaKnown RBP15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 GUCY2FP51841 1108 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 FAM153CQ494X1 144 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 RNF10Q8N5U6 811 aaKnown RBP15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 KRT12Q99456 494 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 CAPS2Q9BXY5 557 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 EMILIN3Q9NT22 766 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 FAM153AQ9UHL3 310 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 GNGT1P63211 74 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 TTMPQ5BVD1 217 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 EMBQ6PCB8 327 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 TRIM59Q8IWR1 403 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 SH2D3CQ8N5H7 860 aa15.35■□□□□ 0.05
GAPVD1-205ENST00000394084 GOLPH3Q9H4A6 298 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms