RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 TLE2Q04725 743 aa21.61■■□□□ 1.05
PDLIM7-204ENST00000393546 KRT40Q6A162 431 aa21.61■■□□□ 1.05
PDLIM7-204ENST00000393546 PKD2L1Q9P0L9 805 aa21.61■■□□□ 1.05
PDLIM7-204ENST00000393546 MROH7Q68CQ1 1323 aa21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 DCDC2CA8MYV0 355 aa21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 MMP1P03956 469 aa21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 PSMC6P62333 389 aa21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 SLC43A3Q8NBI5 491 aa21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 OXER1Q8TDS5 423 aa21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 C8orf76Q96K31 380 aa21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 TOX2Q96NM4 488 aa21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 SDF4Q9BRK5 362 aa21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 AGO4Q9HCK5 861 aaKnown RBP21.6■■□□□ 1.05
PDLIM7-204ENST00000393546 H0YGN5 161 aa21.59■■□□□ 1.05
PDLIM7-204ENST00000393546 PQBP1O60828 265 aaKnown RBP21.59■■□□□ 1.05
PDLIM7-204ENST00000393546 HOXD8P13378 290 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-204ENST00000393546 SETQ01105 290 aaPredicted RBP21.59■■□□□ 1.05
PDLIM7-204ENST00000393546 SAFBQ15424 915 aaKnown RBP eCLIP21.59■■□□□ 1.05
PDLIM7-204ENST00000393546 ANKRD33Q7Z3H0 272 aa21.59■■□□□ 1.05
PDLIM7-204ENST00000393546 GPR20Q99678 358 aa21.59■■□□□ 1.05
PDLIM7-204ENST00000393546 PRKAG2Q9UGJ0 569 aa21.59■■□□□ 1.05
PDLIM7-204ENST00000393546 KIF3AQ9Y496 699 aa21.59■■□□□ 1.05
PDLIM7-204ENST00000393546 GRIN2DO15399 1336 aa21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 NFASCO94856 1347 aa21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 IGLV3-22A0A075B6J6 115 aa21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 TLR3O15455 904 aaKnown RBP21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 CHMP4BP1P59074 171 aa21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 SP4Q02446 784 aa21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 INF2Q27J81 1249 aa21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 NBPF20Q3BBV1 942 aa21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 PRR16Q569H4 304 aa21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 KATNAL1Q9BW62 490 aa21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 ZMYND8Q9ULU4 1186 aaPredicted RBP21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.58■■□□□ 1.05
PDLIM7-204ENST00000393546 EDIL3O43854 480 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 GUCY1B3Q02153 619 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 NR5A1Q13285 461 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 PRPF38BQ5VTL8 546 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 PIK3AP1Q6ZUJ8 805 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 DIS3L2Q8IYB7 885 aaKnown RBP21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 SEPT1Q8WYJ6 367 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 KAT2BQ92831 832 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 ZNF577Q9BSK1 485 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 JPH1Q9HDC5 661 aaPredicted RBP21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 SLC9A2Q9UBY0 812 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 DOCK5Q9H7D0 1870 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 DNAH12Q6ZR08 3092 aa21.57■■□□□ 1.04
PDLIM7-204ENST00000393546 CYP3A7-CYP3A51PA0A087WV96 503 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 BTBD18B2RXH4 712 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 IPO5O00410 1097 aaKnown RBP21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 CLTBP09497 229 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 ZNF286BP0CG31 522 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 CYP3A7P24462 503 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 PSEN2P49810 448 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 FAM47CQ5HY64 1035 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 NFRKBQ6P4R8 1299 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 MOXD1Q6UVY6 613 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 FBXO18Q8NFZ0 1043 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 PRDM5Q9NQX1 630 aaPredicted RBP21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 TBC1D22BQ9NU19 505 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 SCN10AQ9Y5Y9 1956 aa21.56■■□□□ 1.04
PDLIM7-204ENST00000393546 F2P00734 622 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 SYN1P17600 705 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 PTPN11Q06124 597 aaPredicted RBP21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 FAAP100Q0VG06 881 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 ITGB3BPQ13352 177 aaPredicted RBP21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 LETM2Q2VYF4 491 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 Q4G0T1 1027 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 UTP14CQ5TAP6 766 aaKnown RBP21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 NEK8Q86SG6 692 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 FAM126BQ8IXS8 530 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 NAP1L4Q99733 375 aaKnown RBP21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 C16orf70Q9BSU1 422 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 TMEM39AQ9NV64 488 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 PCDH10Q9P2E7 1040 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 SMC3Q9UQE7 1217 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 CEP290O15078 2479 aa21.55■■□□□ 1.04
PDLIM7-204ENST00000393546 GSTTP1A0A1W2PQM5 241 aa21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 H3BRB1 525 aa21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 LGALS2P05162 132 aa21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 TCF7P36402 384 aaPredicted RBP21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 MFSD10Q14728 455 aa21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 KIAA0753Q2KHM9 967 aa21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 TNFRSF25Q93038 417 aa21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 LENG9Q96B70 501 aa21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 TUT1Q9H6E5 874 aaKnown RBP21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 PDLIM7Q9NR12 457 aa21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 TELO2Q9Y4R8 837 aa21.54■■□□□ 1.04
PDLIM7-204ENST00000393546 HAS3O00219 553 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 TDP2O95551 362 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 CD4P01730 458 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 SUPT20HL2P0C7V6 817 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 GCFC2P16383 781 aaKnown RBP21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 GJB2P29033 226 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 CUL4AQ13619 759 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 EARS2Q5JPH6 523 aaKnown RBP21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 PPP4R3AQ6IN85 833 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 C7orf31Q8N865 590 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 MBOAT7Q96N66 472 aa21.53■■□□□ 1.04
PDLIM7-204ENST00000393546 UIMC1Q96RL1 719 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms