RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 IGFBP4P22692 258 aa14.25□□□□□ -0.13
CTSC-202ENST00000393301 GNAQP50148 359 aa14.25□□□□□ -0.13
CTSC-202ENST00000393301 ADAM17P78536 824 aa14.25□□□□□ -0.13
CTSC-202ENST00000393301 TCTN1Q2MV58 587 aa14.25□□□□□ -0.13
CTSC-202ENST00000393301 PCNX4Q63HM2 1172 aa14.25□□□□□ -0.13
CTSC-202ENST00000393301 GPKOWQ92917 476 aaPredicted RBP eCLIP14.25□□□□□ -0.13
CTSC-202ENST00000393301 ALG1Q9BT22 464 aa14.25□□□□□ -0.13
CTSC-202ENST00000393301 USP26Q9BXU7 913 aa14.25□□□□□ -0.13
CTSC-202ENST00000393301 H3BRB1 525 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 TNFRSF10AO00220 468 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 LGR5O75473 907 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 LGALS2P05162 132 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 DEFB103AP81534 67 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 ZNF618Q5T7W0 954 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 RPAINQ86UA6 219 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 SGMS1Q86VZ5 419 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 CTCFLQ8NI51 663 aaPredicted RBP14.24□□□□□ -0.13
CTSC-202ENST00000393301 KCNB2Q92953 911 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 RAD9AQ99638 391 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 GPR20Q99678 358 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 TSPYL2Q9H2G4 693 aaPredicted RBP14.24□□□□□ -0.13
CTSC-202ENST00000393301 TUT1Q9H6E5 874 aaKnown RBP14.24□□□□□ -0.13
CTSC-202ENST00000393301 MLXIPQ9HAP2 919 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 COG5Q9UP83 839 aa14.24□□□□□ -0.13
CTSC-202ENST00000393301 RALGAPA2Q2PPJ7 1873 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 C17orf102A2RUQ5 167 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 GTPBP6O43824 516 aaPredicted RBP14.23□□□□□ -0.13
CTSC-202ENST00000393301 TLL1O43897 1013 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 REC8O95072 547 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 CALM1P0DP23 149 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 CALM2P0DP24 149 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 CALM3P0DP25 149 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 MCM5P33992 734 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 ERVK-21P61565 698 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 HTRA4P83105 476 aaPredicted RBP14.23□□□□□ -0.13
CTSC-202ENST00000393301 ZNF200P98182 395 aaPredicted RBP14.23□□□□□ -0.13
CTSC-202ENST00000393301 IKBKEQ14164 716 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 NECTIN1Q15223 517 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 PLEKHG4Q58EX7 1191 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 FCHSD1Q86WN1 690 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
CTSC-202ENST00000393301 GPRASP2Q96D09 838 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 RRP36Q96EU6 259 aaKnown RBP14.23□□□□□ -0.13
CTSC-202ENST00000393301 IL17RAQ96F46 866 aa14.23□□□□□ -0.13
CTSC-202ENST00000393301 PRC1O43663 620 aa14.22□□□□□ -0.13
CTSC-202ENST00000393301 SMIM10L2AP0DMW4 78 aa14.22□□□□□ -0.13
CTSC-202ENST00000393301 SMIM10L2BP0DMW5 78 aa14.22□□□□□ -0.13
CTSC-202ENST00000393301 BMP1P13497 986 aa14.22□□□□□ -0.13
CTSC-202ENST00000393301 GRB10Q13322 594 aa14.22□□□□□ -0.13
CTSC-202ENST00000393301 AAK1Q2M2I8 961 aa14.22□□□□□ -0.13
CTSC-202ENST00000393301 FAM26DQ5JW98 314 aa14.22□□□□□ -0.13
CTSC-202ENST00000393301 SRBD1Q8N5C6 995 aaKnown RBP14.22□□□□□ -0.13
CTSC-202ENST00000393301 GIMAP8Q8ND71 665 aaPredicted RBP14.22□□□□□ -0.13
CTSC-202ENST00000393301 CDHR1Q96JP9 859 aa14.22□□□□□ -0.13
CTSC-202ENST00000393301 RNPEPQ9H4A4 650 aa14.22□□□□□ -0.13
CTSC-202ENST00000393301 TCF20Q9UGU0 1960 aaKnown RBP14.22□□□□□ -0.13
CTSC-202ENST00000393301 NLRC5Q86WI3 1866 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 LCHNA4D1U4 455 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 LINC01553A4QN01 128 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 RSPH10B2B2RC85 870 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 SLC27A2O14975 620 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 RSPH10BP0C881 870 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 GNAT1P11488 350 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 COL9A3Q14050 684 aaPredicted RBP14.21□□□□□ -0.13
CTSC-202ENST00000393301 CCDC85BQ15834 202 aaPredicted RBP14.21□□□□□ -0.13
CTSC-202ENST00000393301 USP17L6PQ6QN14 398 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 SKAP1Q86WV1 359 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 ADAMTS19Q8TE59 1207 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 PPM1EQ8WY54 764 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 CUL5Q93034 780 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 ATP6V0A1Q93050 837 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 BCAS3Q9H6U6 928 aa14.21□□□□□ -0.13
CTSC-202ENST00000393301 SEC63Q9UGP8 760 aaKnown RBP14.21□□□□□ -0.13
CTSC-202ENST00000393301 ZNF215Q9UL58 517 aaPredicted RBP14.21□□□□□ -0.13
CTSC-202ENST00000393301 TTC3P53804 2025 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 RFXAPO00287 272 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 NOP56O00567 594 aaKnown RBP14.2□□□□□ -0.14
CTSC-202ENST00000393301 MAFGO15525 162 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 TREHO43280 583 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 PLEKHA8P1O95397 391 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 KCNA2P16389 499 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 CHMP4BP1P59074 171 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 RNF20Q5VTR2 975 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 CREB3L3Q68CJ9 461 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 TMTC3Q6ZXV5 915 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 CYFIP1Q7L576 1253 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 NLRX1Q86UT6 975 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 IL27Q8NEV9 243 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 DBF4BQ8NFT6 615 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 SMARCC2Q8TAQ2 1214 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 ARNTL2Q8WYA1 636 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 TGS1Q96RS0 853 aaKnown RBP14.2□□□□□ -0.14
CTSC-202ENST00000393301 UHRF1Q96T88 793 aaPredicted RBP14.2□□□□□ -0.14
CTSC-202ENST00000393301 INSL6Q9Y581 213 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 UBIAD1Q9Y5Z9 338 aa14.2□□□□□ -0.14
CTSC-202ENST00000393301 NRCAMQ92823 1304 aa14.19□□□□□ -0.14
CTSC-202ENST00000393301 RCAN1P53805 252 aa14.19□□□□□ -0.14
CTSC-202ENST00000393301 SPRED2Q7Z698 418 aa14.19□□□□□ -0.14
CTSC-202ENST00000393301 FBXL16Q8N461 479 aa14.19□□□□□ -0.14
CTSC-202ENST00000393301 APBB2Q92870 758 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms