RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 A0A0G2JLL6 359 aaPredicted RBP12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 SPDYE5A6NIY4 337 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 EML1O00423 815 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 MUTP22033 750 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 SLC12A3P55017 1021 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 PGM5Q15124 567 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 TPD52L1Q16890 204 aaPredicted RBP12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 B3GNT9Q6UX72 402 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 APTXQ7Z2E3 356 aaKnown RBP12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 TMC6Q7Z403 805 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 PRRT2Q7Z6L0 340 aaPredicted RBP12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 FILIP1Q7Z7B0 1213 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 PNMA8AQ86V59 439 aaPredicted RBP12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 VSTM4Q8IW00 320 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 PROCA1Q8NCQ7 364 aaPredicted RBP12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 KIAA0895Q8NCT3 520 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 CNKSR2Q8WXI2 1034 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 TAAR1Q96RJ0 339 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 CTAGE1Q96RT6 745 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 ELP3Q9H9T3 547 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 INTS13Q9NVM9 706 aa12.78□□□□□ -0.36
SMARCAL1-203ENST00000392128 A0A1B0GTH6 734 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 IPO5O00410 1097 aaKnown RBP12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 CXCL11O14625 94 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 FCER1AP12319 257 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 MRPS9P82933 396 aaKnown RBP12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 TREML2Q5T2D2 321 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 XRRA1Q6P2D8 792 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 RMDN3Q96TC7 470 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 HSD17B14Q9BPX1 270 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 TEKT3Q9BXF9 490 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 JADE2Q9NQC1 790 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 PXMP2Q9NR77 195 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 DNM3Q9UQ16 869 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 IRF6O14896 467 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 CCNE1P24864 410 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 SPAG1Q07617 926 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 BAATQ14032 418 aaPredicted RBP12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 GPBP1Q86WP2 473 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 LRRC8AQ8IWT6 810 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 SYT2Q8N9I0 419 aaPredicted RBP12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 CACTINQ8WUQ7 758 aaKnown RBP12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 PDCD2LQ9BRP1 358 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 ACAD9Q9H845 621 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 KCNH7Q9NS40 1196 aa12.77□□□□□ -0.37
SMARCAL1-203ENST00000392128 CYP11B2P19099 503 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 EIF2AK2P19525 551 aaKnown RBP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 PPIL2Q13356 520 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 NR1I3Q14994 352 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 EAPPQ56P03 285 aaPredicted RBP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 TTI2Q6NXR4 508 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 MB21D1Q8N884 522 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 NOC3LQ8WTT2 800 aaKnown RBP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 P2RX5Q93086 422 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 ZFP91Q96JP5 570 aaPredicted RBP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 CLMNQ96JQ2 1002 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 LIMA1Q9UHB6 759 aaKnown RBP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 KCNH4Q9UQ05 1017 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 LCTP09848 1927 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 FRMD3A2A2Y4 597 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 TRIM49BA6NDI0 452 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 LRRC10BA6NIK2 292 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 SSBP05455 408 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 IDEP14735 1019 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 PSMC6P62333 389 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 COASYQ13057 564 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 TTLL12Q14166 644 aaPredicted RBP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 ARHGEF16Q5VV41 709 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 LBX2Q6XYB7 198 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 ARMC9Q7Z3E5 817 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 CCDC150Q8NCX0 1101 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 UNC45AQ9H3U1 944 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 THAP9Q9H5L6 903 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 AGO4Q9HCK5 861 aaKnown RBP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 SLC39A2Q9NP94 309 aa12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 ADD3Q9UEY8 706 aaKnown RBP12.76□□□□□ -0.37
SMARCAL1-203ENST00000392128 COBLO75128 1261 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 SLITRK3O94933 977 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 EYA4O95677 639 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 CYP4A11Q02928 519 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 LRMPQ12912 555 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 MTMR1Q13613 665 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 EPHA7Q15375 998 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 MOB2Q70IA6 237 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 CCDC65Q8IXS2 484 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 GUF1Q8N442 669 aaKnown RBP12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 CHST13Q8NET6 341 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 KIAA1524Q8TCG1 905 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 NEK9Q8TD19 979 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 HPS3Q969F9 1004 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 RTN4Q9NQC3 1192 aaKnown RBP12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 PANK4Q9NVE7 773 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 RGL1Q9NZL6 768 aa12.75□□□□□ -0.37
SMARCAL1-203ENST00000392128 DHX15O43143 795 aaKnown RBP12.74□□□□□ -0.37
SMARCAL1-203ENST00000392128 CHMP2AO43633 222 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms