RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 PCDHB4Q9Y5E5 795 aa2.84□□□□□ -1.95
RNU6-1228P-201ENST00000391014 H7BY64 318 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 MEFVO15553 781 aaPredicted RBP2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CYP7B1O75881 506 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SCG5P05408 212 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CKMP06732 381 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SNRPB2P08579 225 aaKnown RBP2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 GJA8P48165 433 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 GTF2A2P52657 109 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 DGCR2P98153 550 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 GRIN1Q05586 938 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 FOXE3Q13461 319 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 FHL2Q14192 279 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 TESK1Q15569 626 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 Q6ZSN1 163 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 GPR155Q7Z3F1 870 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 ZNF227Q86WZ6 799 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CRACR2BQ8N4Y2 399 aaPredicted RBP2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 TMEM145Q8NBT3 493 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CPLX3Q8WVH0 158 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 EXTL1Q92935 676 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 C1orf159Q96HA4 380 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CHAMP1Q96JM3 812 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 TMEM209Q96SK2 561 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 JAM3Q9BX67 310 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 ZNF341Q9BYN7 854 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 BARX1Q9HBU1 254 aaPredicted RBP2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CLDND1Q9NY35 253 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 HSPBP1Q9NZL4 362 aa2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 PPARGC1AQ9UBK2 798 aaKnown RBP2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 COA3Q9Y2R0 106 aaPredicted RBP2.83□□□□□ -1.96
RNU6-1228P-201ENST00000391014 B2RBV5 119 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SLC27A2O14975 620 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 MSCO60682 206 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 KNG1P01042 644 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 LTFP02788 710 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CSF2RBP32927 897 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 GRIA2P42262 883 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 GLRBP48167 497 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 ZNF143P52747 638 aaPredicted RBP2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 GFRA1P56159 465 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 KCNAB2Q13303 367 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SV2CQ496J9 727 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 MIIPQ5JXC2 388 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 ACBD5Q5T8D3 534 aaPredicted RBP2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 C6orf15Q6UXA7 325 aaPredicted RBP2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 Q6ZUG5 572 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 TAX1BP1Q86VP1 789 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 PPIL6Q8IXY8 311 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 DTX3Q8N9I9 347 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 MICAL1Q8TDZ2 1067 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SPATA32Q96LK8 384 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 LRRC37BQ96QE4 947 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SMOC1Q9H4F8 434 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 MYOTQ9UBF9 498 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 ASH2LQ9UBL3 628 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 ZFR2Q9UPR6 939 aaKnown RBP2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 TELO2Q9Y4R8 837 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 NPFFR2Q9Y5X5 522 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SLC4A7Q9Y6M7 1214 aa2.82□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SCAMP3O14828 347 aaKnown RBP2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 NARSO43776 548 aaKnown RBP2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 MYO1BO43795 1136 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 IL18BPO95998 194 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 ZNF888P0CJ79 500 aaPredicted RBP2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 LTBRP36941 435 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 KCNJ6P48051 423 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 HDLBPQ00341 1268 aaKnown RBP2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 NOLC1Q14978 699 aaKnown RBP eCLIP2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 NCAPHQ15003 741 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 PRKD1Q15139 912 aaPredicted RBP2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CHRNA2Q15822 529 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 NRN1LQ496H8 165 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 USP39Q53GS9 565 aaKnown RBP2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SLC35F1Q5T1Q4 408 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 AGBL4Q5VU57 503 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 MRM1Q6IN84 353 aaKnown RBP2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 NT5DC4Q86YG4 428 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 FUKQ8N0W3 1084 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 STPG3Q8N7X2 389 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 PIP4K2CQ8TBX8 421 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 ANAPC16Q96DE5 110 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CHFRQ96EP1 664 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 AJUBAQ96IF1 538 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 LMF1Q96S06 567 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 ADOQ96SZ5 270 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 IKZF4Q9H2S9 585 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SEC61A2Q9H9S3 476 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 DLL4Q9NR61 685 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 C11orf21Q9P2W6 132 aa2.81□□□□□ -1.96
RNU6-1228P-201ENST00000391014 NKRFO15226 690 aaKnown RBP eCLIP2.8□□□□□ -1.96
RNU6-1228P-201ENST00000391014 DGKIO75912 1065 aa2.8□□□□□ -1.96
RNU6-1228P-201ENST00000391014 CPP00450 1065 aa2.8□□□□□ -1.96
RNU6-1228P-201ENST00000391014 COL6A2P12110 1019 aa2.8□□□□□ -1.96
RNU6-1228P-201ENST00000391014 TGFB2P61812 414 aa2.8□□□□□ -1.96
RNU6-1228P-201ENST00000391014 PFKPQ01813 784 aa2.8□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SMAD2Q15796 467 aaKnown RBP2.8□□□□□ -1.96
RNU6-1228P-201ENST00000391014 SKIDA1Q1XH10 827 aa2.8□□□□□ -1.96
RNU6-1228P-201ENST00000391014 RNF207Q6ZRF8 634 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms