RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 CANXP27824 592 aaKnown RBP3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 ITGAEP38570 1179 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 ZNF143P52747 638 aaPredicted RBP3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 PPP2CBP62714 309 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 PPP2CAP67775 309 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 DUSP8Q13202 625 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 SPDYAQ5MJ70 313 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 E4F1Q66K89 784 aaPredicted RBP3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 JAZF1Q86VZ6 243 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 RBM12BQ8IXT5 1001 aaKnown RBP3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 DTX3Q8N9I9 347 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 APBA2Q99767 749 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 TANGO6Q9C0B7 1094 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 PCDH18Q9HCL0 1135 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 ADAM29Q9UKF5 820 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 SUGT1Q9Y2Z0 365 aa3.13□□□□□ -1.91
SNORA40.19-201ENST00000390846 MATN2O00339 956 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 HOXC12P31275 282 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 RBL2Q08999 1139 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 SF3A1Q15459 793 aaKnown RBP3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 NTRK3Q16288 839 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 PCSK4Q6UW60 755 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 C6orf15Q6UXA7 325 aaPredicted RBP3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 KBTBD2Q8IY47 623 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 SLC43A3Q8NBI5 491 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 USP33Q8TEY7 942 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 SEC16BQ96JE7 1060 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 MRIQ9BWK5 157 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 BTG4Q9NY30 223 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 KLHL42Q9P2K6 505 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 ASH2LQ9UBL3 628 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 PTPN22Q9Y2R2 807 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 TESMINQ9Y4I5 508 aa3.12□□□□□ -1.91
SNORA40.19-201ENST00000390846 TCRBV5S4A2TA0A5A2 114 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 H7BY64 318 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 ACOT7O00154 380 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 HGSO14964 777 aaPredicted RBP3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 DLX3O60479 287 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 LTFP02788 710 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 ATF4P18848 351 aaPredicted RBP3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 CSF2RBP32927 897 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 GTF2F1P35269 517 aaKnown RBP eCLIP3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 RPL11P62913 178 aaKnown RBP3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 NFATC3Q12968 1075 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 PPP2R5EQ16537 467 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 SDE2Q6IQ49 451 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 TCTN3Q6NUS6 607 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 ZNF585AQ6P3V2 769 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 NOP9Q86U38 636 aaKnown RBP3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 FAM9AQ8IZU1 332 aaPredicted RBP3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 SH3RF2Q8TEC5 729 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 DIO2Q92813 273 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 ZNF503Q96F45 646 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 TOE1Q96GM8 510 aaKnown RBP3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 AJUBAQ96IF1 538 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 GMLQ99445 158 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 KATNBL1Q9H079 304 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 CAPN10Q9HC96 672 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 KCND1Q9NSA2 647 aa3.11□□□□□ -1.91
SNORA40.19-201ENST00000390846 LOC102724159A0A0B4J2E5 919 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 CYR61O00622 381 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 SMAD7O15105 426 aaKnown RBP3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 SUSD5O60279 629 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 B4GALT4O60513 344 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 ZNF623O75123 536 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 PARNO95453 639 aaKnown RBP3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 MAP4K4O95819 1239 aaPredicted RBP3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 LTBRP36941 435 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 ETFBP38117 255 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 LSAMPQ13449 338 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 PWP2Q15269 919 aaKnown RBP3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 STEAP3Q658P3 488 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 IQCEQ6IPM2 695 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 GLB1LQ6UWU2 654 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 TMC5Q6UXY8 1006 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 Q6ZPA2 131 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 RPUSD2Q8IZ73 545 aaKnown RBP3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 KLHL36Q8N4N3 616 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 TTLL11Q8NHH1 800 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 PMFBP1Q8TBY8 1022 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 STAG1Q8WVM7 1258 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 TRMT2BQ96GJ1 504 aaKnown RBP3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 GNRHR2Q96P88 292 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 CRBNQ96SW2 442 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 JAM3Q9BX67 310 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 AP5M1Q9H0R1 490 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 PRDM16Q9HAZ2 1276 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 PCDHA2Q9Y5H9 948 aa3.1□□□□□ -1.91
SNORA40.19-201ENST00000390846 A0A1W2PQU0 124 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 NKRFO15226 690 aaKnown RBP eCLIP3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 TGM1P22735 817 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 ECI1P42126 302 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 EPHA5P54756 1037 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 NKX3-2P78367 333 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 NCAPHQ15003 741 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 TBR1Q16650 682 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 MIIPQ5JXC2 388 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 FNDC7Q5VTL7 733 aa3.09□□□□□ -1.91
SNORA40.19-201ENST00000390846 SLFN13Q68D06 897 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms